Gene Ping_2808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2808 
Symbol 
ID4625075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3454925 
End bp3456457 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content42% 
IMG OID639797931 
ProductABC transporter ATP-binding protein 
Protein accessionYP_944114 
Protein GI119946434 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAAC AAGTTCAACA AATTCACCAA GACAAACCCG TACTTGAGAT GAAAAATGTA 
TCCAAAACAT TTCCGGGTGT TAAAGCGCTG AATAACGTTT CTCTTACTGT CTATCACTCG
GAAGTACATT CTTTAATGGG TGAAAATGGC GCGGGCAAAT CCACCCTGAT GAAAATACTC
TCTGGTGCAT ATAAGCCGGA TCAAGGTAGT CAGATTTTGG TTAATGGCGA GGTAGTTAAT
ATTACCGATC CGCTTTCCGC TAAAAAACAG GGTATAGCGG TTATTTATCA AGAACTTTCT
TTATCGCCTA ATTTATCCAT TGCGGAAAAT ATTTTTTTGG GAAGCGAAAT ATCCCGTTAT
GGCATCGCTG ATCAGAAAAG CATGGAAGCA CAATCTCAGG ATACTTTAGA CCGTTTGGGA
GTGATTTTTT CACCGAGTAC TAAAGTTTCT ATGCTTTCAA TTGCCGAGCA GCAGATGATT
GAAATCGCCA GAGCAGTGCA TAGCAATGCC AAAATATTAG TGATGGATGA GCCAACAACT
GCACTTTCTA CACGTGAGAC AGGACATCTT TTTACCTTGA TTCACAAACT TCGGGAACAG
GGGTTGGCCA TTATTTATAT TTCCCATCGA ATGTCTGAAA TATATGAGTT GTCCGATAGA
TGCTCAGTAT TAAGAGATGG TTGTTATGTG GGTACCTTAA GCAAAGAGGA GCTGTCATCT
GATTCGTTAG TGAAGATGAT GGTTGGCCGG GACATTTCTG GCTTTTATAA AAAAGATCCT
TTACACCTCT GTACACGGGG AGAAAAAATC CTTGAAATTA AGGGGCTTTC CGATGGACAA
AAAGTAAAAA ACTGCTCTTT CGCGCTACAT CAGGGAGAAG TTCTGGCGAT TGCCGGTCTG
GTCGGATCCG GGCGCACCGA ATTAGCCCGA TTAATTTTTG GGGCAGATAA AAAAAGCACT
GGCGAGATTT TTTTGAACGG TAAGCTGGTG AATATCACGT CACCCAAAGT GGGGATCGAT
ATGGGCATAC TCTATCTTAC GGAAGATCGC AAACATCAGG GTTTATTCCT CGATATGGAT
GTGTCTAATA ACATTAATAT CCTCGCTTTT TCTAAAGACT GTAATAACTC TAAAATGCTC
AACTTACCTA AGAGCGAATC AAGAGCGAAA AAGGCTATCG CCTCATTAGG TATTCGCGTC
GCTAGTGCAA AAGTGGGAGT GGGTACCTTG TCAGGGGGGA ATCAGCAGAA AGTTTTGTTA
TCTAGGCTCC TTGAAATAGC GCCTAAGGTA CTGATTCTTG ATGAACCAAC ACGCGGTGTT
GATGTTGGTG CCAAATCAGA AATCTACAAA ATTATTAATG ATCTGGTTCA AAAAGGGGTT
GCCGTATTAG TGATTTCAAG TGAATTGCCA GAAGTGATCG GTCTCGCTGA CCGGGTGTTG
GTGATGCACG AGGGAGAGAT TTCCGGTGAA TTGACACATG GAAAAGATGA ACTCAATCAA
AACAATATTA TGAAGCTGGC CGCTGGTGCC TAG
 
Protein sequence
MEQQVQQIHQ DKPVLEMKNV SKTFPGVKAL NNVSLTVYHS EVHSLMGENG AGKSTLMKIL 
SGAYKPDQGS QILVNGEVVN ITDPLSAKKQ GIAVIYQELS LSPNLSIAEN IFLGSEISRY
GIADQKSMEA QSQDTLDRLG VIFSPSTKVS MLSIAEQQMI EIARAVHSNA KILVMDEPTT
ALSTRETGHL FTLIHKLREQ GLAIIYISHR MSEIYELSDR CSVLRDGCYV GTLSKEELSS
DSLVKMMVGR DISGFYKKDP LHLCTRGEKI LEIKGLSDGQ KVKNCSFALH QGEVLAIAGL
VGSGRTELAR LIFGADKKST GEIFLNGKLV NITSPKVGID MGILYLTEDR KHQGLFLDMD
VSNNINILAF SKDCNNSKML NLPKSESRAK KAIASLGIRV ASAKVGVGTL SGGNQQKVLL
SRLLEIAPKV LILDEPTRGV DVGAKSEIYK IINDLVQKGV AVLVISSELP EVIGLADRVL
VMHEGEISGE LTHGKDELNQ NNIMKLAAGA