Gene Ping_2794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2794 
Symbol 
ID4626789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3439115 
End bp3440041 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content38% 
IMG OID639797917 
Product2-hydroxyacid dehydrogenase 
Protein accessionYP_944100 
Protein GI119946420 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTG TATTATTGGA TGCAGAAACA TTAAGTGATA GTGATTTATC TCCATTTGAA 
AATTTGGGTG ATTTTATAAG CTATCCGCTG ACCAGCAAGG AACAAAGATT ATTACATATT
GGCGACCGGA ATGTCATTAT CACCAATAAG GTTGTTATTG ATCAGGAAAT TATAGCGGCA
AATCCACAAT TGAAATTAAT CTGTATTGCA GCTACGGGAA TGAACAATGT TGATTTAATT
GCTGCTGAAA AAGCCGGTAT AATGGTTAAA AATGTGTCTG GCTATTCTAC CGAGAGTGTC
GCCCAATCTA CTTTTTCAAT GCTCTTTCAG TTAATACATC AAAGCCGTTA TTATGATCAT
TACACACAGT CTAAAGAATG GTGTAACAGC CCCACCTTTA CGCATCTCAG CAAACCCTTT
GGTGAAATAA AGGGTAAACG TTGGGGCATT ATCGGCATGG GCGAAATTGG TCGACGAGTT
GCTGAAATTG CAAGCGTATT TGGATGTGAA CTTTGTTATT TTTCTGCTTC GGGTAAAAAT
AATCAGCAAG ATTATCCGCA GGTTGATTTG GCAACGTTAT TATCTACCTG TGACATTATT
AGTATTCATG CACCGCTTAA TGAACATACG CATAATTTAA TTGATAAACA GGCGCTAAAA
AAACTAAAAG CAGGGGCTGT TCTACTTAAT ATGGGCCGCG GTGGGATAGT CAATGAAGAT
GCAATGGCTG AAGCGCTTGA TCAGTCGGAT ATTTATCATG GTACTGATGT GCTCGAGATT
GAGCCTATGA TTCAAGACCA TCCCTATTTA TCTGTGCAGG CAAAAGAGCG CTTGGTGATG
ACTCCCCATA CTGCATGGGC CAGTCAAGAA GCAAGAACAA AACTTATCAA TATGATTGTT
GATAATATTA AATCTGCGAA TTTTTAG
 
Protein sequence
MKIVLLDAET LSDSDLSPFE NLGDFISYPL TSKEQRLLHI GDRNVIITNK VVIDQEIIAA 
NPQLKLICIA ATGMNNVDLI AAEKAGIMVK NVSGYSTESV AQSTFSMLFQ LIHQSRYYDH
YTQSKEWCNS PTFTHLSKPF GEIKGKRWGI IGMGEIGRRV AEIASVFGCE LCYFSASGKN
NQQDYPQVDL ATLLSTCDII SIHAPLNEHT HNLIDKQALK KLKAGAVLLN MGRGGIVNED
AMAEALDQSD IYHGTDVLEI EPMIQDHPYL SVQAKERLVM TPHTAWASQE ARTKLINMIV
DNIKSANF