| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2787 |
|---|
| Symbol | |
|---|
| ID | 4627072 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 3428731 |
|---|
| End bp | 3430218 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 639797910 |
|---|
| Product | ABC transporter for sugar (aldose) ATP-binding protein |
|---|
| Protein accession | YP_944093 |
|---|
| Protein GI | 119946413 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0149064 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.48477 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAATC CAAATTTAAT ATTGTCGATC TCAAATATAA CAAAAAAATT CCCGCCGTCA
GTTGTCGCTT TGTCTGATGT GTCATTAGAT ATTTACACAG GAGAAGTACA TGCCATAGTC
GGGGAGAATG GCGCTGGAAA ATCTACTTTA ATGAAAGTGA TTGCGGGTGT TCATAAGCCT
ACATCAGGGA CAATTAATTA TGAGGGTAAT GATGTTGTTT TATCCAACCC AATTATAGCT
AAAAAAATGG GTATTTTATT AATACATCAA GAATTATCTT TAGTAGAAGA AATGACCGTT
GCTGAAAATA TTTTTATAGG TGAATATCCT ACAAAAATGC AGGGTCTAGT TGACTATAAG
CTGCTCTATA AAAGAACGGA CGAAATAATT ACAAAGCTCA AATGTAATTT TTCGTCAAAG
GATAAAGTGA GTCACTTAAG TATTGCTCAA AAACAAATGG TTGAAATTTC AAGAGCATTA
GTTATGAAGC CTAAGGTTAT CATTTTTGAT GAACCTACCG CATCATTAAC AGATACAGAA
AAATTTGTAT TAATGGACTT GATCAATACA TTAAAAAAAG AAGGTGTTGC CATTGTCTAT
ATCTCTCACC GTATGGATGA AATATTCACG TTATCAGATC GTATCAGCGT TTTACGTGAT
GGCGAGCATC GGAAAACCGT AAAAACTCAA GCTACTGATA TAGATGAAGT TATTAAGTTA
ATGATAGGTA GAGAGCTTAA TTTAGATCAT ATAGAACGTA ATAATAAATA TGATAAAACG
GTTATTGAAC TAAAAAACTT AACCCAAAAA AATGTTTTCA AGGATATTTC ATTCTCTGTT
AAACAGGGAG AAATACTGGG AATGTATGGC CTTATTGGTG CCGGCAGAAC GGAAGTGGCA
GAAGCAATAT TTGGCATAAG AAAAATTGAT TCAGGCGAAA TATATATAAA TGACCAATTA
GCCGATATCA ACTCTAGCGA AAAGGCAGTT AAAAATGGTA TTGCCCTTGT TCCTGAAGAC
AGGAAAGAGC AAGGCCTGGT TTTGGAGATG AGTTGTAAAG AGAATCTGAC ATTATCAATT
TTACAGACAA TAGGTAATTT TGGATTTTTG AATAGTGATC TGGAAAAAAA ATTGATGCTG
GAATACAAAG ACTTATTGAG CATTAAAATG GCAGATATAA ACGATAAAAT ATCTACATTA
AGCGGCGGAA ATCAGCAGAA AATCATCATT GGAAAATGGC TAGTCACCAA TCCTAAATTG
CTTATATTAG ATGAACCAAC AAGAGGTATT GATATTGGTT CTAAAGCTGA AATTCATAAT
TTGATTAGAA AGTTAGCTAA TGAGGGATAT GCGATTTTAG TTATTTCATC TGAGATGCCA
GAAGTGATAA GCCTTTCCGA TAGAGTCCTG GTCTTGAGGG ATGGGCAAAT TTCAGGCGAA
TTTTCGGGTA AAGATATCAC TGAAGAAGAT TTGGCTCTTA CAATTTAA
|
|---|
| Protein sequence | MSNPNLILSI SNITKKFPPS VVALSDVSLD IYTGEVHAIV GENGAGKSTL MKVIAGVHKP
TSGTINYEGN DVVLSNPIIA KKMGILLIHQ ELSLVEEMTV AENIFIGEYP TKMQGLVDYK
LLYKRTDEII TKLKCNFSSK DKVSHLSIAQ KQMVEISRAL VMKPKVIIFD EPTASLTDTE
KFVLMDLINT LKKEGVAIVY ISHRMDEIFT LSDRISVLRD GEHRKTVKTQ ATDIDEVIKL
MIGRELNLDH IERNNKYDKT VIELKNLTQK NVFKDISFSV KQGEILGMYG LIGAGRTEVA
EAIFGIRKID SGEIYINDQL ADINSSEKAV KNGIALVPED RKEQGLVLEM SCKENLTLSI
LQTIGNFGFL NSDLEKKLML EYKDLLSIKM ADINDKISTL SGGNQQKIII GKWLVTNPKL
LILDEPTRGI DIGSKAEIHN LIRKLANEGY AILVISSEMP EVISLSDRVL VLRDGQISGE
FSGKDITEED LALTI
|
|---|
| |