| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2746 |
|---|
| Symbol | |
|---|
| ID | 4626007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 3368938 |
|---|
| End bp | 3369945 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639797866 |
|---|
| Product | ABC transporter periplasmic substrate-binding protein |
|---|
| Protein accession | YP_944052 |
|---|
| Protein GI | 119946372 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR03261] putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.553799 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTC GTTTGATAAA AACAACACTC GCAGCAGCGT TGGCATTATG TGCTGCAAAT
AGTTATGCAA CACAGAATGT AACGGTTTAT ACCGCATTTG AAACAGACCT TTTAGCAAAA
TATAAAAACG CTTTTGAAAA TGATAATCCG GATATTTCTA TCAAATGGGT ACGTGATTCA
ACGGGTATTA TGACCGCAAA ATTATTAGCC GAAAAGAATA ACCCCCGTGC CGAAGTTGTT
TGGGGACTCG CAGGATCTTC AATGGCTTTA TTAAAAACTG AAGGCATCTT AAAAACTTAT
ACACCAAAAG GTCTCGCCGC GTTAGATCCC TCGTTAAATG ATCCTCAGGC GGATCAGGCC
TGGTTTGGTA ATGATGCCTT TTTTAATGCT ATTTGTTTTA ACGATATAGT GGCTGAACAG
TACAACTTAC CACTGCCAAC ATCATGGGAT GATTTAACAA AACCTGTCTA TAAAGGTCAT
ATCGCTATGC CAAATCCAGC CTCATCGGGT ACGGGTTATA TGCAGGTATC AGCATGGTTA
CAAAATATGG GTGAAGGAAA AGCCTGGAAC TACATGACAG AATTGGATAA AAATATCTCT
CATTATACAC ATTCGGGTTC AAAACCTTGT GTGCAGGCAG GCATGGGCGA AGTGGCTATT
GGTATTTCCA TGGCAAGTCG CGGCACTAAG CTAAAAACAC AAGGTGCACC ACTGACATTA
GTGACGCCCG AGGGAATTGG TTGGGAATCT GAAGCGGTGG GTTTAGTAAA AGACAATGCT
GCAGCTAAAC GTGTTGTTGA CTGGTCTGTT TCCAAACAAG CGAATGAATT ATATATAGAA
GTGTACCCTG TGGTTGGGCA TAAAGACGTA CATAAAGAAG TCAAAAACTT CCCGAATGTG
AAACCCGTGA TGGCAAAAAT GGATTTTGCG CGTATGGGTG ACCAGAGAGC ACAAGTGTTA
AAAACATGGT CTGAAAAATT CGATAGCAAA TCAGAACCAA GAAGTTAA
|
|---|
| Protein sequence | MKTRLIKTTL AAALALCAAN SYATQNVTVY TAFETDLLAK YKNAFENDNP DISIKWVRDS
TGIMTAKLLA EKNNPRAEVV WGLAGSSMAL LKTEGILKTY TPKGLAALDP SLNDPQADQA
WFGNDAFFNA ICFNDIVAEQ YNLPLPTSWD DLTKPVYKGH IAMPNPASSG TGYMQVSAWL
QNMGEGKAWN YMTELDKNIS HYTHSGSKPC VQAGMGEVAI GISMASRGTK LKTQGAPLTL
VTPEGIGWES EAVGLVKDNA AAKRVVDWSV SKQANELYIE VYPVVGHKDV HKEVKNFPNV
KPVMAKMDFA RMGDQRAQVL KTWSEKFDSK SEPRS
|
|---|
| |