Gene Ping_2674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2674 
Symbol 
ID4625295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3277977 
End bp3278612 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content42% 
IMG OID639797800 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_943986 
Protein GI119946306 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.172224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0331815 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA CACTAATTAT AGGCGCAAGC GGACAAATCG GTAAAATGAC GACAAAGCAA 
CTGTTAGCCG ATGGTAAAAC AGTAATAGCC TTAGTGCGTG ATAAAAGTAA ATTGGCTGAT
ATTAGCTGCG ATAAACTGCA CATAGTTGAG GGGGATTTGG AGAATGACTT CAGCCAGGCA
TTTGCAGATT GCGATCAGGT CATATTCAGT GCCGGCTCCG GTGGCAAAAC AGGCGATGAT
AAAACCATGC TTATTGATTT ATGGGCCGCA TGTAAAGCCG TAGATTACGC AAAATTGGCT
AATGTTTCAC ATTTTGTTAT GGTCAGCTCT ATTGGCGCTG ACGACCCTTC CCAAGGTACA
GAAATCATGA AGCCTTACAT GGTTGCCAAA CATATGGCCG ATGAACACTT GATAGGCAGT
GGGCTAAATT ACACCATATT TAGACCTGGC TTATTAACCG ATAATAACGC CACAGGTAAA
GTGAAAACCA TCAGGCCCAG CAACAAAGAA GATATGACCA TTAATCGAGA AGATGTCGCC
AGCGTACTGA CCTATACAGT AGGTAAATCT GAGCTAGGTG GGAAAATATT TGAATTATTT
AACGGCGAAA AAACCCTCGC TGATATATTA AATTAA
 
Protein sequence
MKKTLIIGAS GQIGKMTTKQ LLADGKTVIA LVRDKSKLAD ISCDKLHIVE GDLENDFSQA 
FADCDQVIFS AGSGGKTGDD KTMLIDLWAA CKAVDYAKLA NVSHFVMVSS IGADDPSQGT
EIMKPYMVAK HMADEHLIGS GLNYTIFRPG LLTDNNATGK VKTIRPSNKE DMTINREDVA
SVLTYTVGKS ELGGKIFELF NGEKTLADIL N