Gene Ping_2617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2617 
Symbol 
ID4624325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3209375 
End bp3210685 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content44% 
IMG OID639797747 
Productcitrate synthase I 
Protein accessionYP_943935 
Protein GI119946255 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01798] citrate synthase I (hexameric type) 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.819839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTAC ACAGTCTCAC CATTACCGAT AACCGTACCG GTAAAAGTTA CGAAATTCCT 
ATTCGATATG GCACCTACCC TAACTATGGC GCATCCATTA ATGCGCTTGA ACTCCGCAAC
ATAAAAGTAT CTGAACAAGA CTTTGGCCTG TTAACCTATG ATCCTGGTTA TACAAATACC
GCTTCCTGTA AGAGCAGTGT GACATTTCTT GATGGCGAAA AGGGCATTCT TCGTTATCGG
GGTTACCCTA TTGAGCAATT AGCAGAAAAA AGTACTTATT TAGAAACCGC CTATCTAATC
TTAAACGGTG AGCTGCCTAA CCAAACTCAG TTGAATGGGT GGCATAAAGA TATTATGGCG
CATACTTTTA TACATGAAAA CATCAAAAAA TTGATAGACA GTTTTCATTA TGATGCACAC
CCTATGGGTA CTTTAGTCGG TACTGTGGCG GCGTTATCTA CGTTTTACCC GGATGCCAAA
AATATTCATG ATCAAGCCTG TCGGGATAGG CAAATTTGGC GCTTAATTGC CAAGATGCCG
ACCCTTGCGG CCTTTTCTTA TCGGCATAGT ATTGGACTGC CTTATGTTTA CCCGGATCAA
AGTCTCTCTT ACATTGGCAA TTTCATGAGT ATGTTATGGA AAAAAAGTGA ACTGCAATAT
CAGCCAAATC CGATTTTAGA AAAAGCCATC AATGTACTTT TTATTCTGCA TGCGGATCAT
GAACAGAATT GTGGTACTAG CGTTATGCGC GCCGTGGCCA GCGCTTACAG CGATCCTTTC
TCGGCGACCT CCTCGGCAAT AGCTGCATTG TACGGGCCTT TGCATGGTGG TGCGAATGAG
GCGGTATTGC ATATGTTAGC GGAGATCGGT TCCGTCGATC GTGTACCTGA GTTTATTAAG
ACTGTAAAAT CCGGCGAAGT GAGTCGTTTG ATGGGGTTTG GTCATCGTGT CTATAAAGAG
TATGATCCTC GCGCAAAAAT TTGTAAGACA TTAGCAAATG AAGTTTTTTC TGTAACGGGT
GTCAATCCAC TACTGGCTAT TGCCCTGGAA CTTGAGAGAG TGGCACTACA GGATGACTAT
TTTATCTCCC GTCATCTCTA CCCTAACGTT GATTTTTATT CCGGCTTGAT TTATCAGGCA
ATGGGATTCC CCGTCGGAAT GTTCCCCGTC CTGTTTGCTA TTGCGCGTAA TACGGGCTGG
CTGGCGCAAT GGCAGGAATT TCTTGTCGAT CCTGACCATA AAATAGCCCG CCCCAGACAA
ATCTATTGTG GCAGTGAAGT GCGCGATTAT ATTGCAGTCG ATAAGCGTTG A
 
Protein sequence
MKVHSLTITD NRTGKSYEIP IRYGTYPNYG ASINALELRN IKVSEQDFGL LTYDPGYTNT 
ASCKSSVTFL DGEKGILRYR GYPIEQLAEK STYLETAYLI LNGELPNQTQ LNGWHKDIMA
HTFIHENIKK LIDSFHYDAH PMGTLVGTVA ALSTFYPDAK NIHDQACRDR QIWRLIAKMP
TLAAFSYRHS IGLPYVYPDQ SLSYIGNFMS MLWKKSELQY QPNPILEKAI NVLFILHADH
EQNCGTSVMR AVASAYSDPF SATSSAIAAL YGPLHGGANE AVLHMLAEIG SVDRVPEFIK
TVKSGEVSRL MGFGHRVYKE YDPRAKICKT LANEVFSVTG VNPLLAIALE LERVALQDDY
FISRHLYPNV DFYSGLIYQA MGFPVGMFPV LFAIARNTGW LAQWQEFLVD PDHKIARPRQ
IYCGSEVRDY IAVDKR