Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2604 |
Symbol | |
ID | 4624312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 3196266 |
End bp | 3198440 |
Gene Length | 2175 bp |
Protein Length | 724 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639797734 |
Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
Protein accession | YP_943922 |
Protein GI | 119946242 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.110209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.266065 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTTA CATTAGATAT TTCACAATCA GGCCCAACTT CGGGGGTTGC AACATTGACC TTTGATTTTC CGGGGGCACG AGTTAATAAA TTAGATTCAG TCGCATTATT AGAGCTCAAA GGGCAGATTG ATTCTCTGGC AAAAAATAAT GTCGTTAAAC TGTTGGTCTT TCGCAGTGCC AAAAAGGATA CCTTTATTGC CGGCGCTGAT ATCAATGAAA TTAAAGATCT GCTTAATGAG GCACAAGCTT ATAAAGAAAT AAGAACCGGG CAGTTAATTA TTGATAATAT TTCTAAATTA CCTTTTCCAA CCTTAGCGGT TATAAACGGG GTCTGTCTGG GTGGCGGTTG TGAGTTAGCG TTAGCTTGTA CTTATCGCAT CGCCACGGAT AATCTTAACG CTATTATAGG CTTACCCGAG GTCAGTTTGG GTATTATTCC CGGTTTTGGC GGTTGTGTGC GTTTACCAAA ACTGATTGGC TTACAAGCTG CTCTGCAGTT AATACTGTCC GCTAAACCTG TCGCCCCTAA AAAAGCGCTG CGACTCAAAT TAGTCGATCA TCTCTATAAT AATGAGCTTG AAGAAAGTTC AGTCGCTGAT TTTATCGAAC GTTTAGTGAA TGATAAAAGC TTTGTGAAAG GGTTAATAAA GCGCCGTTCA AAGTCTGCTA AGAAATTTAA CCAGAGAATT TTAGAAGATA ATATTTTAGG GCAAAAACTG ATTTTTAAAA AAGCCAAAGA CAGTTTGCTT AAAAAAAACA AAGGTCAATA TCCCGCGCCG CTTAAAGCTT TAGAAACCAT AGAAAAATCA TTCAATTTAA AAATAGCGGA AGCGTTAGAG GTAGAAGCGA GAGCCATTTC TGAGCTTGCT GTTAGCGTAA TAAGTAAAAA TTTAATTCAA CTTTTTTTTA CCTCTGAGGC ATTAAAAAAA GAAACCGGTA TTGTCGAATC CAATCTTGAG CCACAAATAA TTAATCAGGC CGCGGTACTC GGCGCAGGGG TTATGGGCGG GGGGATCGCC TGGTTATTTT CAAAAAATGA GATACCGGTC AGGCTTAAAG ATATTGAATG GGATGCGGTC AGTAAAGGTT ATCAAACCGC GGCGCTCTAT TATGGACAAT TAAAAAAAGT CCATAAAATT AACGAAAATA AGATCCGCGT TAAAATGAAT TATATTGCAG GGACGGTCAA TTATAACGGT TTTAAAAGAA TTGATCTGGT TGTTGAAGCG GTGTCTGAAA ATCTAGAGGT TAAGAAAACA GTCCTGGAAG AGGTTGAAGC ACAGCTGTCT AAGCAGGCGA TATTAGCGTC GAACACCTCG AGTTTATCCA TTACTGAGAT GGCTGTAAAT CTGCAAAGGC CGGAAAATTT TATCGGTATG CATTTTTTTA ATCCGGTTAA CAGAATGCCG CTTGTTGAAA TTATACCGGG GGAGAAAACC AGCCAACAGA CCATTGTCAC ATTGGTTAAA CTCGCTAAAA AAGCCGGTAA AACACCCATT GTTGTTGCTA ACTGTGCAGG TTTTTTAGTC AATAGAATTT TAATTTCATT TTTGAATGAA GCCGCTCTGA TGCTTCAGGA GGGAGGCGTT GTTACCGAAA TGGACCATGC TCTTGAAGCA TTCGGGTTGC CGATGGGACC TTTTGTTTTA GCCGATGAGG TCGGTATCGA TATTGGTTAT CATGTTGCAA AAGTATTAGA GCAAGCCTAT GGCGAAAGAA TGAAAGTGGC GGGTTTATTT ACCCAAATTT TTATCGATGA GAAGTTATTA GGTAAAAAAT CGGGTGTGGG TTTTTACCGC CACAAAGGCC ACGACAAATC CTACAATGAG GCGCTGGATA AGATTATCTA TACTTATCGT TTTAGCAATG GAATAACAGC CAAAGCATTT AACCAGGAGG AAATCGTAGA CAGGTGCATT CTTATTATGG TCAATGAAGC GGTCAAATGT TTACAGGAAA ATATTGTTAA GAATCCGGCT TATCTGGATA TGGCAATGAT CCTCGGTACA GGTTTTCCTG CATTTACAGG CGGTCTTTTA AAATATGCCG ATAATCGTGG CATCGGCAAT ATTTGCGATA CATTAAATCA ATTAGCGGCT TTATATGGTG AGCGTTTTCT GCCCGCTGAG CAATTAATAG ATAAAGCAAA AAACGGCGGG AAATTTTATA ATTAG
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Protein sequence | MNFTLDISQS GPTSGVATLT FDFPGARVNK LDSVALLELK GQIDSLAKNN VVKLLVFRSA KKDTFIAGAD INEIKDLLNE AQAYKEIRTG QLIIDNISKL PFPTLAVING VCLGGGCELA LACTYRIATD NLNAIIGLPE VSLGIIPGFG GCVRLPKLIG LQAALQLILS AKPVAPKKAL RLKLVDHLYN NELEESSVAD FIERLVNDKS FVKGLIKRRS KSAKKFNQRI LEDNILGQKL IFKKAKDSLL KKNKGQYPAP LKALETIEKS FNLKIAEALE VEARAISELA VSVISKNLIQ LFFTSEALKK ETGIVESNLE PQIINQAAVL GAGVMGGGIA WLFSKNEIPV RLKDIEWDAV SKGYQTAALY YGQLKKVHKI NENKIRVKMN YIAGTVNYNG FKRIDLVVEA VSENLEVKKT VLEEVEAQLS KQAILASNTS SLSITEMAVN LQRPENFIGM HFFNPVNRMP LVEIIPGEKT SQQTIVTLVK LAKKAGKTPI VVANCAGFLV NRILISFLNE AALMLQEGGV VTEMDHALEA FGLPMGPFVL ADEVGIDIGY HVAKVLEQAY GERMKVAGLF TQIFIDEKLL GKKSGVGFYR HKGHDKSYNE ALDKIIYTYR FSNGITAKAF NQEEIVDRCI LIMVNEAVKC LQENIVKNPA YLDMAMILGT GFPAFTGGLL KYADNRGIGN ICDTLNQLAA LYGERFLPAE QLIDKAKNGG KFYN
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