| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2592 |
|---|
| Symbol | |
|---|
| ID | 4624284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 3179507 |
|---|
| End bp | 3181618 |
|---|
| Gene Length | 2112 bp |
|---|
| Protein Length | 703 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639797723 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_943911 |
|---|
| Protein GI | 119946231 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1262] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.249838 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTATAA AACAATTAAA AACACCCTTA CTGACTGGCA CATCAGTTGC GCAGAAACGA
GCTGAATTAA AGCAGTATTA TGCTAATACA GTTCATACTT ATGAGTCACT GTTCAGCTTA
ATCAATAATG ATGATGCTTA TTATTTAAGA CCCGAACCGT TACGCCACCC GTTAATTTTT
TACTTTGGGC ACACAGCGAC TTTTTACGTC AATAAGTTAA TGTTAGGTAA ATTTATAGAT
AAACGCATCA ATCAAAAGCT TGAAGCTATT TGCGCAGTAG GTGTTGATGA AATGAGTTGG
GATGATCTTA ATGGTACGCA TTATGATTGG CCTAAGGTTG ATGAGATTAT TGAATATCGG
CGCCAAGTTT TTGCACTGGT TAATGACCTA ATCGATAATA TGGAGATTAG TTTACCCATT
TGTAAAGGCT CTTTAGCCTG GGTTATGTTA ATGGGTTGCG AGCATGAGCG CATTCATTTA
GAAACTTCCT CGGTTATCAT GAGAATGTTA CCTGTTAAGG ATTTGACATC CAATCAAGAC
TGGTTGGCTT GTACTTCAGC TGGCGCTGCC CCTGAAAACA CATTACTTGC TGTTGAGGGC
AAAGCACTTA CCTTGGGCAG AGCAGATGAC CATCAAACTT ATGGTTGGGA TAACGAATAC
GGGCAGACAA AAGTGCAGGT TGAACCTTTT AAAGCCTCAA AGTTTGTAGT CTCAAATGGA
GAGTTTATTG AATTTATAGA AGCGGGTGGT TATCAAAACA AAAGCTATTG GAGTGAGGAA
GGGCAACAAT GGCTGGCATT TAAACAGGCT AAGATGCCAA GATTCTGGTC GGAAATAAAT
AATCAATATT GGCAGCGTAA TTTATTAAAT GAAATTCCAT TACCTTTGAA TTGGCCGGTT
GAAGTAAATT ATTTAGAAGC CAAAGCCTTT TGCAACTGGA AAAATAGCAG CAGTGAACAT
TACATTCGTA TGCCAACTGA AGCAGAATGG TACTGTTTAC GAGATATGGT AGACAGCGAC
CTTACTAATT GGCGGCAAGC GCCAGGTAAT ATTAATTTAG AATACTTTGC ATCGTCATCA
CCCGTTGATC AATTTTCAGA AAATGATTTT TTTGATTTAT TGGGTAATGT CTGGCAGTGG
ACAGAATCTG CAATCGACGG TTTTGAAGGA TTTCAGGTTG ATCCGCTTTA TGATGATTTT
TCAACACCTA CCTTTGACGG TCAGCATAAT CTTATTAAGG GGGGATCATG GATCTCAACG
GGTAATGAAG CAATTAAACA CGCCCGTTAT GCTTTTCGTC GTCATTTCTT TCAACATGCA
GGATTTCGTT ATATTGAATC AGTCTCAGAA ACCATTCCAA CCATACCGGT AAACCAATAT
GTAACAGATA AAAAAATCTG TACTGAATTG GAGGCGCATT TTGGTGATAA TTATCTAGGA
TTGGGCAATT ATTCCGTCAC TCTGGCGAGG TATGTCCTTA AGCAGTTAAA CAATTTTTCA
ATAGCGAAAG GAAAGTTGCT TGATTTGGGA TGCAGCGTAG GACGTTGTAG TTTTGAGTTA
TCTCCTTATT TTGAAGCGGT TGACAGTGTT GATTTCTCTG CTCAGTCTAT ACCTTACTCA
GTGCAGTTAC AGCAGGGGAA AACCGTTCGT TATGAGCTTG AAAAAGAAGG TGAGCTGGTT
GACTTTAAAG AGATTAATTT GAATTCTGCT GGGTTAAATG CAAACTACCG GAACATTCAC
TTTAAACAAG GCGATCCGAG CAACTTAAAA GCGTCATTTG ATGACTATGA TGTAATTATT
GCCCAGCAGG TGCTTGAGCA AAATTATGAT CCTCTGCAGT TTTTACGTAC TATTTCAGGC
TCTTTAAAGG AAGGGGGGAT TTTAATACTG GCATCTGCCT ATGATTTTAA CCCGGAAATT
AAACCTGAAA AAAGATTTTC TGGTAAGAAA GTAAATGGTG AAAACTTTAC TGGTTTTGAT
GCCGTTCAAC AGGCCTTGTC TGCTCAGTTT TCGTTAGTTG CCAGTGAGAA CATAGCAAAG
CCATCACGTC ATTGCGCACG TAAATTTACG GTCACCAATC AACATATTAC CCTATGGAAA
AAGTTAGTTT AA
|
|---|
| Protein sequence | MTIKQLKTPL LTGTSVAQKR AELKQYYANT VHTYESLFSL INNDDAYYLR PEPLRHPLIF
YFGHTATFYV NKLMLGKFID KRINQKLEAI CAVGVDEMSW DDLNGTHYDW PKVDEIIEYR
RQVFALVNDL IDNMEISLPI CKGSLAWVML MGCEHERIHL ETSSVIMRML PVKDLTSNQD
WLACTSAGAA PENTLLAVEG KALTLGRADD HQTYGWDNEY GQTKVQVEPF KASKFVVSNG
EFIEFIEAGG YQNKSYWSEE GQQWLAFKQA KMPRFWSEIN NQYWQRNLLN EIPLPLNWPV
EVNYLEAKAF CNWKNSSSEH YIRMPTEAEW YCLRDMVDSD LTNWRQAPGN INLEYFASSS
PVDQFSENDF FDLLGNVWQW TESAIDGFEG FQVDPLYDDF STPTFDGQHN LIKGGSWIST
GNEAIKHARY AFRRHFFQHA GFRYIESVSE TIPTIPVNQY VTDKKICTEL EAHFGDNYLG
LGNYSVTLAR YVLKQLNNFS IAKGKLLDLG CSVGRCSFEL SPYFEAVDSV DFSAQSIPYS
VQLQQGKTVR YELEKEGELV DFKEINLNSA GLNANYRNIH FKQGDPSNLK ASFDDYDVII
AQQVLEQNYD PLQFLRTISG SLKEGGILIL ASAYDFNPEI KPEKRFSGKK VNGENFTGFD
AVQQALSAQF SLVASENIAK PSRHCARKFT VTNQHITLWK KLV
|
|---|
| |