Gene Ping_2477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2477 
Symbol 
ID4624429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3025845 
End bp3029261 
Gene Length3417 bp 
Protein Length1138 aa 
Translation table11 
GC content42% 
IMG OID639797611 
ProductADP-ribosylation/crystallin J1 
Protein accessionYP_943805 
Protein GI119946125 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1397] ADP-ribosylglycohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.462272 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAA TAACTATTCC GTGTAAATAC TTAGATCGTG TCTTTAAAAA ACCAGAGCAA 
ATGGGCCATC GAGGTGATCC TATGTTATGG GATTGGTTAA AAGACAATCT TAAAAGTGCT
GGCGATGAAT CAACGGGTGA AGAACTGCTG CGTGAGATAC GTAATCACCT TGAAGAGTTT
GGTGTAGATT TATCCGGTCG TTTTGATGAG TCGCAAGGTG ACGTGCATAT AAAAGCATTC
GATAGAGGGG GAATGTCCGG CATCTGCGTT AGTACACGAT GGTGGGTAAG AAAAGGCTTG
CCTCTTATTG AGCAGCGTTT AACTGATGTC AGTAAGGTTT TGGCTTTTAA GCAAATGAAG
TTACCAAGAA ATGTAGAAAA GCTGTTTTTT ATCGGTGATA TCCACGCTCA ATACGAAAAA
TTGACCGATC TCTTAACGCA TTGTGGTTAT ATTGAATCAG AGCCTGAAAA TGCTTTTACC
TACGGCAGGT TGGTATTTCT GGGTGATCTT ATTGACAATA AACCGGACTG GGGAGGTGAT
CACCTTTCAC TGCTAAATCA TATTAAAGAT CTGGTTGATA AAAGATTGGC TTATTGCGTA
TTGGGCAACC ACGAGTTTAA TGCCATTGGC TGGAGCCTTA AAAAGCCAGA TGGCAGTTAT
TGTCGGGATA GAAACAAATC GGGCAACCGT CGGCAGCATC AATTATTTCT TGAACAAGTT
GGTGAAGATT CCAGGCAATA TCACCAATGG ATCGAGTGGT TTAAAACCTT GCCTTTGTTC
ATGGATTTTG CCGATGTGCG CGTGATCCAT GCTTGTTGGC ATCAGGAATC TATCGATAGA
ATCCGTCCCT ATCTAAATGA TGATAACAGT TTGAAAACAG AGTATTGGTA TGATGCATTT
GACCCTGAAC ATGAGTTATA TCAGTTTTGT GAAACCTTGT TAAAAGGGCC CGAAATCGCG
CTGCCTGAGG GCTGTTCATT TAAAGATAAA AATAAGATTG AGCGAAAAAA TATCCGGGTC
GGCTGGTGGA AAGCCCAAGA AGATATTAAA ACCTTCAGAG ATCTTGCTGT TGTGCCGAAT
GCCGAAGGAG ATTTTATTCC TGATCTGCCT GTACAGTCTA TGCATACAAG ATTCAATAAG
GAGCAGGATG TGCCTGTTGT GGTTGGTCAT TATACGCTTA ATTCCGCCGT TCCTTATTGT
GTCGGGGATA AGGTGGTTTG TGTTGATTTT AATGCCGCGT CTCCCGGTAA AAGACTTAAT
GGTTATGTGG TGAATGTGAC GTCCTGGAAA AGTGCTGATG AGCTGGTATC TGAAGATAAT
TTTTGCGCGA TTGAGTTGGT CAATGCAGAT ATTATCGTTT GGCTGGGAGT CGATAACATT
TTAAGCGAAT ACCTTGAGTC CATTGCGCTG CCGGAGCTGA ATGAGGAACT CTCTGAGTCT
TTACTCGAAA AAATAGGTGC GATCCTTAAA CATGAATGGG CGCCACGAAA CTCAGTTTTG
AAGATTGAAT ATGATAATTA TCTAGAGGAT GTACTTAAGC TTGCGGGTGC TCAAAAAGAA
GATGAACTGA CTATGTATCT TTATTTTACT GAAAAATACA TTCAAGGCAT AGAAAGGGAG
CATGCAGTAT CAGTGTGCAG AAGGGTTGCC AGCTATATCA CTGCCATGGT TAAGAATGAA
TCTGAGAAAG TGGCTGATTC ACCAACCTAT GATGAAGCAT TACGAGCTAA GTTTATCTCC
AAAGCCAAGG GATCTTTATT GGGTCTTGCA CTTGGCGATG CATTGGGAAC CACGCTGGAG
TTTAAGAGCA AAGACAGTTA TCAGCCATTA ACTGATATGG TTGGCGGAGG CCCTTTCCGG
TTAGAGGCCG GTCAATGGAC CGATGATACA TCAATGGCAC TTTGCCTGGC TGATAGTTTT
CTCGCTGTGG GCAGACATAA TGCAGAAGAT CAAATGCAGC GTTATATAAG ATGGCGAGAT
TTAGGTGAAA ACTCTGTTAC AGGAAAATGC TTTGATATAG GCAATACAGT CTCAGCTGCT
ATCAATCAAT ATTTATCGAC AAAAGATGCA AATGCGGGCA GTCAGGAAGC TTATAGCGCC
GGGAATGGCA GTCTGATGCG TCTTGCTCCG GTCGCTATAT TTTACTCACC AGCTAAAAAT
GTTGAGTTAG CTGAGCTGTT AGACAAAGCC AGATTATCTT CGATCGTTAC ACATGCAGAA
CCAAGAGCAA TTGAAGGTTG TCAGATCATG GCCTGGCTAC TGTTTCAGAT TTTTGATGGC
GAGCAAAGTA AAGTCTCGTT GTTTAAAGGA CTTTCGGTTG CATTCACAGA TCTAAGTACT
GATATGGAGA AAATTGTAGC GGGCAGTTTC TTAAGGAAAG AGAGAAGTCA AATAAGAGGA
ACTGGTTTTG TTGTTGATTC TCTGGAAGCA GCTTTATGGT GTTTTGCAAA CAGCGAAAGT
TTTGAACAGG GCGCTTTATT AGCTGCAAAC CTTGGCGATG ATGCAGATAC TACCGCCGCC
ATCTTTGGAC AGTTAGCCGG AGCATTTTAT GGTATTGAGC AATTGCCTGA GCATTGGCTT
CGCAAGCTTG CATGGCGAGA TAAGTTAGAG CAAACGGCTG AATTTTTGGC ATTAACTCCG
CCATTTTCGC AGTTGACTGA ACTGATAACA GATATTCAAG AAAAAACGGA TAACGGTCGA
ACTGCGCTTC ATATCTCAGA TAAGCTATTC ATGGATTTTT ACCGCTTTAA TATGATACTC
AATTATACTG GATTGGAATT TGAGATAAGA GATCCATGCG AAGTTATCCA GCGATTTAAT
TATCTAGAAT GTCTGCGTTA TCTCACTGTA TTGATAAGAG GAGAGAAATT CAATCCTGAC
GGGATAAGCA ACACGGAAAG AAGTGGAGAT ATTGATTTAT GGGCGCAGGG ATTAACTGAG
TTGTATGACT TCCAACCACA TGAGGAGTAT GGATATGATC CAGAACTTGA GTCGGATAAA
TGGGGAAGAA AGCCTTCAGC AAAAGTATCA CGTATCAACC TTGATGAAAG CTTTGATACA
GACAGTATTT TTGATTATGG CAGTGGTGAA AAAAAAGTGC GAACAGAGCA AAACAAAGTA
AACCATTGCC CTATTTGTAA TCAGGAGATA TATTTTTCGC AACGATATCC CAATTACGTG
TGTGAACGAT GCTCAGCTCA TCCTGTAGAT GAAAACGGGC GAGAGTTAAG CTTCCATAAT
ACTTACTTCT CTGGTGGAGG TTTTAAGGCT CAGTATGTAG ATAGCAAAGA AATAAGGGAT
TCCAATATCT GTTATATCGA AGGGATAAAG TGTTGGGCAG CCGAAGCCTA CATGGGCGGA
ATAGTGGTTC AATTATTTAC CGAAGCGATT GAACGAGAGC ATGATAGTTG GAATTGA
 
Protein sequence
MNKITIPCKY LDRVFKKPEQ MGHRGDPMLW DWLKDNLKSA GDESTGEELL REIRNHLEEF 
GVDLSGRFDE SQGDVHIKAF DRGGMSGICV STRWWVRKGL PLIEQRLTDV SKVLAFKQMK
LPRNVEKLFF IGDIHAQYEK LTDLLTHCGY IESEPENAFT YGRLVFLGDL IDNKPDWGGD
HLSLLNHIKD LVDKRLAYCV LGNHEFNAIG WSLKKPDGSY CRDRNKSGNR RQHQLFLEQV
GEDSRQYHQW IEWFKTLPLF MDFADVRVIH ACWHQESIDR IRPYLNDDNS LKTEYWYDAF
DPEHELYQFC ETLLKGPEIA LPEGCSFKDK NKIERKNIRV GWWKAQEDIK TFRDLAVVPN
AEGDFIPDLP VQSMHTRFNK EQDVPVVVGH YTLNSAVPYC VGDKVVCVDF NAASPGKRLN
GYVVNVTSWK SADELVSEDN FCAIELVNAD IIVWLGVDNI LSEYLESIAL PELNEELSES
LLEKIGAILK HEWAPRNSVL KIEYDNYLED VLKLAGAQKE DELTMYLYFT EKYIQGIERE
HAVSVCRRVA SYITAMVKNE SEKVADSPTY DEALRAKFIS KAKGSLLGLA LGDALGTTLE
FKSKDSYQPL TDMVGGGPFR LEAGQWTDDT SMALCLADSF LAVGRHNAED QMQRYIRWRD
LGENSVTGKC FDIGNTVSAA INQYLSTKDA NAGSQEAYSA GNGSLMRLAP VAIFYSPAKN
VELAELLDKA RLSSIVTHAE PRAIEGCQIM AWLLFQIFDG EQSKVSLFKG LSVAFTDLST
DMEKIVAGSF LRKERSQIRG TGFVVDSLEA ALWCFANSES FEQGALLAAN LGDDADTTAA
IFGQLAGAFY GIEQLPEHWL RKLAWRDKLE QTAEFLALTP PFSQLTELIT DIQEKTDNGR
TALHISDKLF MDFYRFNMIL NYTGLEFEIR DPCEVIQRFN YLECLRYLTV LIRGEKFNPD
GISNTERSGD IDLWAQGLTE LYDFQPHEEY GYDPELESDK WGRKPSAKVS RINLDESFDT
DSIFDYGSGE KKVRTEQNKV NHCPICNQEI YFSQRYPNYV CERCSAHPVD ENGRELSFHN
TYFSGGGFKA QYVDSKEIRD SNICYIEGIK CWAAEAYMGG IVVQLFTEAI EREHDSWN