Gene Ping_2463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2463 
Symbol 
ID4627146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3014029 
End bp3015273 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content43% 
IMG OID639797599 
Productphage integrase family protein 
Protein accessionYP_943793 
Protein GI119946113 
COG category[L] Replication, recombination and repair 
COG ID[COG0582] Integrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.384114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0605266 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATAA AAGTTAAGCC TTTAACGGCT ACACAAGTCC TTCAAGCTAA ACCAAAAGAC 
AAAGTTTATA ACCTGGGAGA TGGTGATGGC TTATCTTTAA AGATTTTGCC GTTAGGCTCA
AAGTTGTGGC GCTTTTCTTA TTATCGGCCA GTCAGTAGGA AAAGAGCGCA TTTAGCTTTA
GGTATATATC CTTCGGTATC TTTAGCCAAA GCTAGAACCA AAGCGATTGA AGCCAGAAAA
CTGCTTGCTG ATGGCATTGA TCCTAAAGAA CAAAGAGACA CCACACTTAA AGCCCAACAA
ATTGAGCTTT CAAATACACT CCAAGCTGTA TTTGAAGATT GGTTTGCCGT TAAAAAAACC
AGCATTAAAG AATTAACAGC AAAAAAGTTA AAACAACGCT TAGATAAATA CCTGTTAACT
TATCTTGGCA AATTCCCTAT TGCTGAAATC ACCGCCCCAC AAGCGATCAA AATCCTGCAG
CCAGTTGCTA ACCAAGGCAA ACTTGAAACT GTTGGCAGGC TTTGCCGTAA TCTTAATGAA
ATAATGACAT TTGCAGTTAA CACCGGAATT ATAGAGCACA ACAAGCTTGC CGGTATTGGC
AAAGCGTTTG CAACCGCTCA AGTCACTAAC CAAGCTTCGC TGAAGCCAGA AGAGCTACCA
GAGCTACTCA TAGCCCTTAA CTACGCCAAT ATAAAACTTA TCACTCGCTG TTTGATTGAA
TGGCAACTGC ATACTATGAC CCGCCCTGCT GAAACAGCTG GTGCTCGCTG GGGTGAAATT
GATAAAGAAA ATAAACTTTG GCACATCCCA CCCGAACGCA TGAAAAAAGG CAGGCCGCAT
ACAGTCCCCC TAACAACACA AACACTCGCG CTGTTAGAGA CAATTGATTC AATTACGGGT
GACAGTGAAT ATATCTTCCC GGCAGATAAA ACTAATAAAA AACATATTTG CAAGGAGACA
GCGAACAAAG CACTCGCAAG AATGGGCTTT AAAGGTCGCC AGACGTCACA CGGATTACGT
GCCCTGGCAA GTACCACCCT GAATGAGCAA AACGTCTTCG ATGCAGACGT GATTGAGGCC
GCCCTTTCAC ACGTTGATAA AGATAAAGTG AGAAGTGCTT ACAACCGCAC TGACTACCTT
GAGCGCCGCC GCGTACTAAT GGGCTGCTGG AGTGATCATA TTGAAGAGGC ATCGAAAGGA
TCTAACTCAA TCACCGGATT AAAAGCGCTA AAGATTGTTA ATTAA
 
Protein sequence
MAIKVKPLTA TQVLQAKPKD KVYNLGDGDG LSLKILPLGS KLWRFSYYRP VSRKRAHLAL 
GIYPSVSLAK ARTKAIEARK LLADGIDPKE QRDTTLKAQQ IELSNTLQAV FEDWFAVKKT
SIKELTAKKL KQRLDKYLLT YLGKFPIAEI TAPQAIKILQ PVANQGKLET VGRLCRNLNE
IMTFAVNTGI IEHNKLAGIG KAFATAQVTN QASLKPEELP ELLIALNYAN IKLITRCLIE
WQLHTMTRPA ETAGARWGEI DKENKLWHIP PERMKKGRPH TVPLTTQTLA LLETIDSITG
DSEYIFPADK TNKKHICKET ANKALARMGF KGRQTSHGLR ALASTTLNEQ NVFDADVIEA
ALSHVDKDKV RSAYNRTDYL ERRRVLMGCW SDHIEEASKG SNSITGLKAL KIVN