| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2461 |
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| Symbol | |
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| ID | 4627143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 3010993 |
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| End bp | 3012924 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639797596 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_943791 |
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| Protein GI | 119946111 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.42133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.125855 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTTT ATATTGCCGA AAAACCAAGC CTGGCACGTG CGATTGCTGA TGCGCTACCA
AAACCGCATC GTAAAGCAGA CGGTTGTATT TATGTTGGTA ATGGAGATGT TGTAAGCTGG
TGCATCGGGC ATCTGTTAAC TCAGGTTGAT CCCGAGGCTT ATGATCCCGA ATATAAAAAA
TGGAAATTCG AACACCTGCC GATTATTCCC GAAAACTGGA AATTAAAATC AACACCGCGC
ACCAGTAAAC AACTGAGTAT ATTAAAAAAA CTGATCAAAC AGGCTGATAA CCTTGTGCAT
GTTGGCGACC CCGACCGCGA AGGCCAGTTG CTTGTGGATG AGGTGATTCA TTTCAGCGGT
GTTAAGGGCA ATAAATTAAA ACAGGTTGAG CGCTGTTTGG TCAGTGATTT AACCACCAAT
GCGGTAAAAC GTTCGCTTCA GCAATTACGC TCTAATCAGG AGTTTATTGC ATTATCAACC
TCGGCGCTTG CGAGAACGCG TGCTGACTGG TTATATGGGC TAAATTTGAC ACGAGTTTAT
ACCTTACAGG CACAAAAGTC AGGTTATCAG GGGGTTATCT CGGTGGGGCG AGTGCAAACA
CCTTTATTAG GCTTGGTGGC AAGGCGCGAT AAAGAGATTG AAGTTTTTGT GAGTAAACCC
TTTTATGAAG TGGAAGCACA CTTAACGACA CTCAAACCTG AAAATGTTGC TGCCTTTACG
GCCAAATGGA AGCCCAGTGA AGCCTGCGAA AAATATCAGG ATCACGAGGG GCGTGTACTG
GTTAAAAAGT TGGCAGAGAA TGTCGCGCAG CGTATTTCTC AGCAACACGC TGTGGTAAAA
AGCTTTACGG CTAAAAATAA AAAGCAGGTT GCGCCTTTAC CCTATAACTT ATCGGCGTTA
CAGATTGATG CTGCCAAGCG TTTTAGCTAC ACGGCGCTGG AAGTATTGGA TATTTGTCAG
GCATTGTATG AAAAATATAA GCTGATTACT TACCCGCGTT CTGATTCCCG TTATCTGCCT
AAAAATCATC TTTCTCAAGC CGGATCAGTG ACCCGGGCGA TTGCTAATAA CCAGCCTGCT
TTAAAAAAGG CGGTCAGTAA TGCTGATATT TCTTTGCAGA GCCGTGCCTG GAACGATAAG
AAGGTTGATG CCCATCATGC GATAATTCCA ACGGATAAAC ATCAGTCTTT AACGAGTTTA
GATACTGCCT CACAAAATAT TTACGCTTTA ATTGCCCGTC AGTATTTATG CCAGTTTTAT
GCCGATTATC ATTACGGTGA ATGCGTGGCT GAAATTGAAA TAAATAACGG CTTATTTATC
AGTAAAGCAA AAGCTAAAAT CAGCGACGGG TGGAAAGTAT TATTTGATAA GCAGGAGAAA
GACAGTTATT TACCTGCGCT TAGCAAAGGG CAAAAGTTGT TTTGTGATAA AGGTGAGGTG
ATTGAAAAAA ACACTCAGCC GCCAGCCTAT TTTACGGATG CTACTCTGTT AGCCGCAATG
AGTAATATTG CCCGTTATGT GAAAGACGGA GAATTGAAAG CTGTGTTGAA AGAAACCGAT
GGTCTGGGCA CGGAAGCGAC CCGAGCGGGG ATTATTGAGC TGCTGTTTAA ACGTTTGTTT
CTGCAGCGCA CGGGTAAACT TATTAAAGCA ACTGAGACCG GCAGAAAGTT AATTGAAAGT
CTGCCGGAAA TGTTGACCCT GCCTGATATG ACCGCGCAAT GGGAGATGGA ATTAAATGCT
ATCAGTCAAA AAGAGCAAAG TTATCAGGGA TTTGTTGTGC CATTACAAAA TCAGCTTAAA
AGCATTATAG AAAAGGCAAT TGCAGACGGG CCGCGGGCAT TGGCGAATTT ACCAAGCAGT
GGCAATGTTT TTAAGAAAAC CTACAGAAAA AAATCAACAA AAAAAGGCAC TTTTAAAAAG
AAAGGCAGTT AA
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| Protein sequence | MKLYIAEKPS LARAIADALP KPHRKADGCI YVGNGDVVSW CIGHLLTQVD PEAYDPEYKK
WKFEHLPIIP ENWKLKSTPR TSKQLSILKK LIKQADNLVH VGDPDREGQL LVDEVIHFSG
VKGNKLKQVE RCLVSDLTTN AVKRSLQQLR SNQEFIALST SALARTRADW LYGLNLTRVY
TLQAQKSGYQ GVISVGRVQT PLLGLVARRD KEIEVFVSKP FYEVEAHLTT LKPENVAAFT
AKWKPSEACE KYQDHEGRVL VKKLAENVAQ RISQQHAVVK SFTAKNKKQV APLPYNLSAL
QIDAAKRFSY TALEVLDICQ ALYEKYKLIT YPRSDSRYLP KNHLSQAGSV TRAIANNQPA
LKKAVSNADI SLQSRAWNDK KVDAHHAIIP TDKHQSLTSL DTASQNIYAL IARQYLCQFY
ADYHYGECVA EIEINNGLFI SKAKAKISDG WKVLFDKQEK DSYLPALSKG QKLFCDKGEV
IEKNTQPPAY FTDATLLAAM SNIARYVKDG ELKAVLKETD GLGTEATRAG IIELLFKRLF
LQRTGKLIKA TETGRKLIES LPEMLTLPDM TAQWEMELNA ISQKEQSYQG FVVPLQNQLK
SIIEKAIADG PRALANLPSS GNVFKKTYRK KSTKKGTFKK KGS
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