Gene Ping_2457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2457 
Symbol 
ID4627139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3004049 
End bp3006718 
Gene Length2670 bp 
Protein Length889 aa 
Translation table11 
GC content38% 
IMG OID639797592 
Productpeptidase M14, carboxypeptidase A 
Protein accessionYP_943787 
Protein GI119946107 
COG category[R] General function prediction only 
COG ID[COG3608] Predicted deacylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0889296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.334441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC AATATGTTTC GTATCAAGAG ACCATTGATT TCCTGAATAC GGCTGCCACT 
TTGTATCCTG ATTTAATTAA GGTACAGAGT ATTGGTGAAA CGTGGGAAAA GCGGCCAATT
ATGATGGCGA CGATTAGTAT GGATGTTGCC AATGCGGACA CTAAACCCGC TTTATTATAC
ACTGGCACTA TTCATGCGAG AGAGTGGATA GGTATTGAAT TAGCGAATAA TTTTATTAAG
TATATTATTG ATAATTATCA ATTCAATCCT AAGTTGCAAC AAGCATTAAC GCTTAACACG
CTTTATATTG TTCCTTGTTT AAACCCCGAT GGATTTGAGT TCTCTCGGAC TCATTTTTCA
TTTTGGCGAA AAAATCGCCG TGATAATGGT GATAGTACCT TCGGTGTAGA TTTAAACCGT
AACTTTGGCG TGCGATTTAA AACCCGATCC GATACCAGCT CAAATACTTA CAGTGGCCCA
TCCGGCTTTT CAGAGCCGGA AACCTGTGCG ATTCGTGATT TTGTTGAAAC CCATAAAAAT
ATTACCATCG CACTTGATTA CCATTCGCAA GGTAATGTTT TCTTCCCGGC TCATAAATTT
AATCATGAAG CTGAAATAGA TACCACCGAT CTCAATACGC TCTGCGCCAA TATGGCCTTT
GAAATAGAAA AAGTGACCGG TAGAAAATAC GGGATTCATC GCGGAAAACC ACCAACAAAT
TTAATTAATG GCAGTGCTCG AGAGTATTAT TATAATCGCG GCATACTTTC TACCGTTGTA
GAGGTAGGTA CAAAAAATAT TCCTGACTAT ATGGAAAATA TGTCGGAAAG TATCAATGAA
AATATTCCTG CATTAGTGCA CGCTTTTGGC TCCGCTATTA ACTACTCTCA TTTAGCGCCT
AAACGAGTCG ATAATTTTAA TCTCACTGAG TTAACTGAAA ATAGTATTTC GTTAGCATGG
GAATATTCTG ATAACGATCC TGTCTATTTT GAAATTTATC GCAGTATCAG TCATAAAAGT
CCATGTAGCG ACGATAACCT TGTGGGTATT ACTAAATCAT TATTTTTTAC GGATGTGCAG
TTAAAAAGTG GTCGGCACTA CTTTTATAAA ATTCGAGCGG TTGATCAAAA AACTAAAATT
AAAGGCCCTT ATGCGCCTGA GCTTAAATTA AATACCTTAT TAGCGCGTGA CCGATATAGC
AAAACCTTAT TCCCTGCCAG TCAAGATATT GGTTATGTGG GGCAATATAC CCCAGAAAAA
AATCAGGAAC ATTTTGGTTT AAATTCTTTA TTTATTGGGG TGAATAAGTC TCGTGGTATT
TGTTACGGTG TCATCGCTTT TTCTCTCGAC CGCCTACCTG ATGATGCCTC TATTAAAGAA
GCCAGTTTTT CACTCTATCC GATGAACAGG GTGAGTGCAA AAATTGAAGG CTATGGTGAA
TGGGGGATTT CATTTTTAGA GGCGAGCTCT GTCCCTAATA TTCGTGACTA TAACGATATT
GCGAATGCGA CCGTTATTCA CTCGGGGCAA ACCATTGAAT CAGATCATGT TACTCAAGGT
GTCTGGTGTG TTTGGCATTT AAACGGTAAA GAGCGTGATA TTCTGCAAGA ACAATTAAAA
ATGGGGACAG TGCTTATGCG TATTGATGGC CCTACTGTAT TACCTAAAGG TAACGATTCT
CAAATCATGC AATTTGACAT CGGGTATGGT CGCTTTGGCT CTGGTATTCA TTATCGGCCT
AATTTGCACA TCACCTATAG CCGTCAACCT GAAACCGTTG AAGTATATCC TACTGCTGTT
AATACTATCT CTGAACATGG CATTGTATCT GGAAGTTTAC AATCGGGTTA TGATGAAAAT
GGGCATAAAA TTTACGCTCA GTTAGCCTTT TCCTTGCATT CTATGCCTGA TCCAGAAAAA
ACAGTGATCA CCGATGCCTA TCTAGAGCTT GAAAACACTA ACGCCCTCAG TGATAAAAAA
GACATTCGTT TTACTGTCGA ACTTGCTGAA TTTGAAGATG TTAATGTTGA AAGTATTAAG
CAGCGTAAAA GTATTCAGTA TATTGGATAT GAAGTGGGTT ATGAGCAATT ACGTTATAAA
ACACAACATT TTTTTAATTT TGATACTTTG AGCAGAACAG AACTAGAAAG GTTTCATTTA
GAAAATAAGC AAGCCTATTT CATTATTCGT GCAACCTCCG CATTGAAAAA TGGGCAGGGA
GAATTGATTA AATGGCTTAA TGATCCCGTT CATGAAAAAC AGGCTAAATT AGTTATTCAA
TATATTGAAC GCGCTAAGGT TGCCTTACAG CCTCCAGGCG ATATAAAGAC ATCAATAGAA
AATAGTAAAA CTAAAATCAC CTGGGAAAAC CCTAAAAGCA AAGACTTCTT GGGTTCTTTT
GTGGTTAGAA ATTGTTTTCA TCCACCGCGT ACGCCTTTTG ATGGTGTTAA AATTTATGCG
GGTCAAGATA CCTATACCTA TGATAGTTTT GGTAACCCTA ATATACCGAA ATATTATTCT
ATATTCTCAT ATGATGATGT GCCGAATTAT TCAATTCCAG CTTGTATTCA CTTCAGTGTT
GAAGAAACTA TTCCGGTGAT TGAAATTGAT CCTGAGGAGG TTGAAATGCA AGGAGATGAA
GAGATGCAGA GTTCGGCTGA TAATAATTAA
 
Protein sequence
MKKQYVSYQE TIDFLNTAAT LYPDLIKVQS IGETWEKRPI MMATISMDVA NADTKPALLY 
TGTIHAREWI GIELANNFIK YIIDNYQFNP KLQQALTLNT LYIVPCLNPD GFEFSRTHFS
FWRKNRRDNG DSTFGVDLNR NFGVRFKTRS DTSSNTYSGP SGFSEPETCA IRDFVETHKN
ITIALDYHSQ GNVFFPAHKF NHEAEIDTTD LNTLCANMAF EIEKVTGRKY GIHRGKPPTN
LINGSAREYY YNRGILSTVV EVGTKNIPDY MENMSESINE NIPALVHAFG SAINYSHLAP
KRVDNFNLTE LTENSISLAW EYSDNDPVYF EIYRSISHKS PCSDDNLVGI TKSLFFTDVQ
LKSGRHYFYK IRAVDQKTKI KGPYAPELKL NTLLARDRYS KTLFPASQDI GYVGQYTPEK
NQEHFGLNSL FIGVNKSRGI CYGVIAFSLD RLPDDASIKE ASFSLYPMNR VSAKIEGYGE
WGISFLEASS VPNIRDYNDI ANATVIHSGQ TIESDHVTQG VWCVWHLNGK ERDILQEQLK
MGTVLMRIDG PTVLPKGNDS QIMQFDIGYG RFGSGIHYRP NLHITYSRQP ETVEVYPTAV
NTISEHGIVS GSLQSGYDEN GHKIYAQLAF SLHSMPDPEK TVITDAYLEL ENTNALSDKK
DIRFTVELAE FEDVNVESIK QRKSIQYIGY EVGYEQLRYK TQHFFNFDTL SRTELERFHL
ENKQAYFIIR ATSALKNGQG ELIKWLNDPV HEKQAKLVIQ YIERAKVALQ PPGDIKTSIE
NSKTKITWEN PKSKDFLGSF VVRNCFHPPR TPFDGVKIYA GQDTYTYDSF GNPNIPKYYS
IFSYDDVPNY SIPACIHFSV EETIPVIEID PEEVEMQGDE EMQSSADNN