Gene Ping_2448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2448 
Symbol 
ID4627130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2995397 
End bp2995978 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content40% 
IMG OID639797583 
Productsuperoxide dismutase 
Protein accessionYP_943778 
Protein GI119946098 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0103073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0475458 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTTG AATTACCAGC ATTACCCTTT GCAATCGATG CGTTAGAACC ACACATTTCT 
GCTGAGACTC TTGAATTTCA TCACGGCAAA CATCATGCAA CTTATGTTTC AAAATTAAAT
GGGCTAGTTG AAGGTACTGA TTTGGCTGAA AAATCATTAG AAGATATCAT TAAATCTTCT
AAAGGACCTC TGTTTAACAA TGCAGCACAA GTTTGGAACC ATACGTTCTA CTGGAACTGT
CTGGCACCTA ATGCGGGTGG CGAACCTACT GGTGCTGTTG CAGATGCAAT TAATTCAAGT
TTTGGTTCGT TTGCAGAATT CAAAGCAGCT TGGAATGATC GAGCAGTTAA TAACTTTGGT
TCATCGTGGA CTTGGCTTGT GAAAAAAGAA GACGGTTCAC TGGATATTGT TAACACATCA
AATGCAGCTA CCCCATTAAC AGACGCAACA GTAACACCAC TATTGACTGT TGATCTATGG
GAACATGCAT ATTACATCGA TTACCGTAAC GCTCGTCCTA ACTACTTAAA TGGTTTCTGG
GCATTAGTTA ACTGGGATTT TGTGGCTAAA AACCTAGCAT AA
 
Protein sequence
MAFELPALPF AIDALEPHIS AETLEFHHGK HHATYVSKLN GLVEGTDLAE KSLEDIIKSS 
KGPLFNNAAQ VWNHTFYWNC LAPNAGGEPT GAVADAINSS FGSFAEFKAA WNDRAVNNFG
SSWTWLVKKE DGSLDIVNTS NAATPLTDAT VTPLLTVDLW EHAYYIDYRN ARPNYLNGFW
ALVNWDFVAK NLA