| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2443 |
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| Symbol | |
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| ID | 4626409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 2991148 |
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| End bp | 2992281 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639797578 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_943773 |
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| Protein GI | 119946093 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.461656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0916444 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAGACA GCCCAGTTTT GGCTCTTTTA AAAGACTTAA TAAGCCGACG TTCGATTACC
CCAAGCGACG AAGGGTGCCA GCAGTTATTA ATATCTAGAC TTGAAAAATT AGGCTTTGAG
TGTGAAGTAA TGATCTTTGC AGATACTACC AATTTATGGG CACGCAGAGG CACAGAAAAA
CCGCTTTTTT GTTTTGCGGG ACACACCGAT GTGGTACCAA CCGGCCCTGA AGAAAATTGG
ACTTACCCTC CCTTTGAGCC AACCGTTGTC GATGGTTTTT TATTTGGCCG TGGCGCTGCG
GATATGAAAA GTGGTATTGC CGCTTTTATC ATTGCGTTAG AGCAGTTCAT CAAAGCACAC
CAGGATCACC AGGGTTCCAT TGCCTTACTT ATCACCAGCG ATGAAGAGGG ACCTTTTATC
AACGGCACAG TGCGCGTAAT TGAAACACTT GAAGCGCGCA ATGAAAAAAT AGATTATTGT
ATTGTTGGAG AGCCCTCAAG CACAGAGCAT GTGGGTGATA CTATTAAAAA TGGTCGCAGA
GGGTCATTAA CGGCCGATTT AACCATTAAT GGCGTACAGG GTCACGTGGC TTACCCGCAC
ATGGTCGAAA ACCCTATTCA TACCTGCATC GGACCGCTCA CTGAGTTATC ACAGATGGAG
TGGGATAAGG GTAATAAGTA TTTCCCACCA ACCAGTTTTC AGGTAACCAA TTTTAATGCT
GGCACGGGCG CGAGTAATGT TGTTCCTGGA GAAGCACAGA TTCAGTTTAA TTTTCGTTAT
TCGACCGAGT TAACAGCCGA GATGATAATT GCACGTGTGG TAGCTATTTT GCAAAAACAT
AAGCTTAATT ACCAGATTAA GTGGACTTAT AACGGCTCAC CATTTATTAC CCAACCAGGT
TCGTTGACTA ATGCCGTAAG TGAGGCTATC TTTGCTGTCA ATGGATTAAC AACTGAGCTT
TCCACCAGTG GTGGGACCTC CGATGCACGT TTTATTGCAC CGACAGGAGC GCAAGTTGTT
GAACTGGGTC CCGGCAATAA AACCATTCAC AAAGTGAATG AATCAGTAAA AATTGCCGAC
CTGGAGGAGC TGGTACATAT TCACCGGCTG ACTCTGGAAA AATTGTTAAC ATGA
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| Protein sequence | MSDSPVLALL KDLISRRSIT PSDEGCQQLL ISRLEKLGFE CEVMIFADTT NLWARRGTEK
PLFCFAGHTD VVPTGPEENW TYPPFEPTVV DGFLFGRGAA DMKSGIAAFI IALEQFIKAH
QDHQGSIALL ITSDEEGPFI NGTVRVIETL EARNEKIDYC IVGEPSSTEH VGDTIKNGRR
GSLTADLTIN GVQGHVAYPH MVENPIHTCI GPLTELSQME WDKGNKYFPP TSFQVTNFNA
GTGASNVVPG EAQIQFNFRY STELTAEMII ARVVAILQKH KLNYQIKWTY NGSPFITQPG
SLTNAVSEAI FAVNGLTTEL STSGGTSDAR FIAPTGAQVV ELGPGNKTIH KVNESVKIAD
LEELVHIHRL TLEKLLT
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