| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2413 |
|---|
| Symbol | |
|---|
| ID | 4625959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 2956771 |
|---|
| End bp | 2958276 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639797549 |
|---|
| Product | Ppx/GppA phosphatase |
|---|
| Protein accession | YP_943744 |
|---|
| Protein GI | 119946064 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0248] Exopolyphosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.58803 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0004512 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAAT CCGTTGAACA AAAAGTACGC AATATAGCCG CTATTGACTT GGGATCAAAC
AGCTTCCACA TGGTAGTCGC AAAAGTGGTG GGGCAGGATC TCCAGATGGT CAGTCGCCAT
AAACAGAGAG TGCGCTTAGC ATCCGGGCTT GATAGTGAAA TGAATTTAAG CGACGCTGCA
ATAGAACGCG GACTTTTGTG TTTGGTGATG TTTGCAGAAC GTTTACAAGG ATTTGAAGGT
GACAATGTGC GTATTGTCGC AACGCATGCT CTGCGCCAGG CAAATAACGC CCCTGTTTTT
ATCCAGCGCG CGCGCGAAGT GTTGCCTTTC CCTATCGAAA TTATTTCAGG CGAAGAAGAA
GCGCGTCTTA TTTATCTGGG GGTTGCCCAT ACACAGGTTG AATCAGACTC CAAACTTGTT
GTCGATATTG GTGGTGGCAG TACTGAAATG ATCATCGGTC AGGGGTTTGA AGTTGATCTG
CTCAACAGTC AGCAAATGGG ATGTGTGAGC TTTACCAATC AATTTTTTAA TAATGGCAAG
CTTTCTAAAA ATAATTTTGC AAAAGCAACA CTGGCTGCGG AGCAACGCCT TAAGCCACTT
GTCAAACAAT ACAGGAAAAA AGGCTGGAGC ACCGCATTTG GCTCATCAGG TACGATCAAA
GCCATTAAGG AAGTACTGAT TGGCTTTGGC TATCACGACG GCTTGATTAC TCATAAGCGA
CTCCAAGAAT TGATAGATGC ACTGTGCACC TTTGACAGTA TTGATGCTAT CGAGCTCTCG
GGATTAAGCA AAGAGCGAAA GCCCGTTTTT GCAGCGGGTG TTGTTATTTT AAATGCACTT
TTTCAAGCGT TTCAAATTAT TGAAATGCAT TTCTCCGATG GTGCATTGCG GGAGGGGGTG
TTGTATGAAA TGGAAGCCCG TTTTGCCCGC TCAGATATCC GCATGCGCAC TACCGAAAAT
TTAGCCAATA AACATAATGT TGAATTAAAT CATGCAGTTT GTGTTAAGCA TCAGGCGACT
GAATTATTTT CCCAAATCCG TCAAACTTTG GGTATCAAAA AGCACAGTGA GCTGCTGTCG
TTATTGCAGT GGGCCGCATT GTTACATGAA GTTGGCTTAA ATATCAGCTT ACCCGGTTTT
CACCGCCATT CAGCCTATAT ACTGCAGCAT ACTAATATGC CCGGTTTTAA TAGTGAGCAG
CAATTAGTGC TTGCCACTCT GGCACGTTTT CAGTGTAAAT CATTGAAACT GAATGAAATG
CCTGAATTTA ACTTGTTTGA TAAAAACCAT TTACTCGCGC TTATAAAAAT ACTTCGGCTG
GCGATTATTC TTAATGGCCA GCGCAACGAT CAGCTATTAC CGGAAATATT ATTAACCGTG
GAAGGTAAGC TCTGGGTGTT GGACTGCGTT AACCAGCTGT GGCTTGAAGA CAATAAATCT
CTGTATGCAG ACTTGTTAGC CGAGCAAGAG CGCTGGTTAA GTGCTGGATG GCAACTTAAA
TTTTAA
|
|---|
| Protein sequence | MSQSVEQKVR NIAAIDLGSN SFHMVVAKVV GQDLQMVSRH KQRVRLASGL DSEMNLSDAA
IERGLLCLVM FAERLQGFEG DNVRIVATHA LRQANNAPVF IQRAREVLPF PIEIISGEEE
ARLIYLGVAH TQVESDSKLV VDIGGGSTEM IIGQGFEVDL LNSQQMGCVS FTNQFFNNGK
LSKNNFAKAT LAAEQRLKPL VKQYRKKGWS TAFGSSGTIK AIKEVLIGFG YHDGLITHKR
LQELIDALCT FDSIDAIELS GLSKERKPVF AAGVVILNAL FQAFQIIEMH FSDGALREGV
LYEMEARFAR SDIRMRTTEN LANKHNVELN HAVCVKHQAT ELFSQIRQTL GIKKHSELLS
LLQWAALLHE VGLNISLPGF HRHSAYILQH TNMPGFNSEQ QLVLATLARF QCKSLKLNEM
PEFNLFDKNH LLALIKILRL AIILNGQRND QLLPEILLTV EGKLWVLDCV NQLWLEDNKS
LYADLLAEQE RWLSAGWQLK F
|
|---|
| |