| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2411 |
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| Symbol | |
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| ID | 4625957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 2953159 |
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| End bp | 2955057 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639797547 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_943742 |
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| Protein GI | 119946062 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00893826 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGCAA TTTTTATCTG CATTAGAATG GGGATAATTA AGCCGCAGAA CTATTCTGTA
TCAATTTCTC TTACCACTAG CTGCGATGAA GAAAATATGC CAAATTTAAC TATATTATCA
CTTGATTTGA TAATCCAAGA TAAAAATCTC AGTGTTTTTT TTCAGCCTAT TGTTGAAAAT
ATTGAACGGA ATATTTTTGG CTATGAAGCA TTAATTCGGG GCCCCTTTAA CAGTCAATTG
TACTCACCCA TTGCCCTTTT TGCTGCAGCA AAAGACCAAA GTAGATTAGT GGAGCTGGAG
CTTTTATGCC GAGAATTATC GATATTACAA TTTAAAAAAC TTAATCTCCA GGGAAAATTA
TTTCTCAATG CCAGCCCTGA AACTCTCTTT CAGCCTAATT TCCGCTCTGG TCAAACATTA
AAATTACTCA AGAAAATAGA CCTTGATCCG AGCCGTGTGG TGATCGAGTT AACCGAACAC
AGTCCTTTAG AAAATTATGA AGTAATTCGA GATGCATTAA AACATTATAA AGAAATGGGC
TTTGAAATTG CGATGGATGA TTTGGGATCC GGTTATTCGG GCTTGCGCGC TTGGTATGAA
TTACGTCCTG ATTATGTAAA GATCGATCGC CATTTTATGT GTGATATTGA CAGCGATAAA
GTAAAGCAGC AATTTGTACT CTCTATCAAA AATATCGCGC AGGAGCTGGG TTGTAAAGTC
ATTGCAGAAG GTGTTGAAAC AGCCAATGAA TTTCGATTTA TAGAAAAAAT TGGTCTGCGG
TTCTGCCAGG GTTACTATTT TAAGCGTCCG GCACCGTTGC CCGTCAGGCG TATCAATAAT
AACTTGTTTA GTGAAAGAAG GTTGACAGCG CAATCTAAAA ATAGACTTAT TTCATCTAAA
ATGGTGGGAG AGTTATTGCA GCCTATTGAT GCAATTAGTA CAGCAACGAC CATTGAATCT
TGCGCTACAT TATTTAAGCA AAAACCTGAT CTAGACAGTA TTCCAGTGCT CGAGAACAAC
AAACCAATCG GTTTAATCCA CCGTAACAAC CTCACTAATT TATTTTTTTC AGCCTATGGC
AGAGAACTCT CAGGCAGAAA GACGATCGCC TCATTGGTTG ATCGCCAGGT ACTGATTTTG
GAACATGACT TACCCGTTGA GCAAGCGAGT ATCTTAATTA GTGATCAAGC TGGAAGAAGG
AAAATACTGG AGTTTATTAT TGTCAATAAG GGGGAATATC AGGGCATTGG CTCAATTATT
GATCTTCTCA AGGAAATAAC CCATCTGCAA ATTAATAACG CACGTTATGC AAACCCTTTG
ACCTTGTTGC CGGGTAACGT GCCGATCAGT AAAAATTTGG ATCAGCGACT TAAAGAACAA
TCACCCTTCA CTATCTGTTA TGTCGATTTA GATCATTTCA AACCGTACAA TGATTGTTAT
GGTTATGAAA AAGGAGACCA AATTATTCTT GGTGTTGCTG ATATTTTGCG GGATATAGTG
ACCGATAGAG ATGATTTTAT TGGCCATATT GGTGGGGATG ACTTTATTGT TATTTTATCT
TCAGATCATT GGCAAATACA ATGCGAAAAA ATACTGGCAA ATTTTTCGGA ATGGGTTATC
CACAGCTATA GTCCGGAAGA CCAGGAGAGG GGCGGAATCG CAAGCGAAGA TCGTACGGGA
GCCAAACAAT TTTATCCTTT ACTGAGTCTA TCGATAGGTT GTGTCAATTT GTCGCCTTCC
ATTTGTAACA GTCATAACGA TGTGGCGGTA TTAGCCTCCT ATGCAAAATC GAAGGCTAAA
AAAATAAAAG GCAATTCATT ATATTTATAT GACAGTAAAA CGACGGCCAA CGCATTGCCA
GAAAAAAAAT ATCTCACCGA GTTATGTCAT AGTTCATGA
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| Protein sequence | MKAIFICIRM GIIKPQNYSV SISLTTSCDE ENMPNLTILS LDLIIQDKNL SVFFQPIVEN
IERNIFGYEA LIRGPFNSQL YSPIALFAAA KDQSRLVELE LLCRELSILQ FKKLNLQGKL
FLNASPETLF QPNFRSGQTL KLLKKIDLDP SRVVIELTEH SPLENYEVIR DALKHYKEMG
FEIAMDDLGS GYSGLRAWYE LRPDYVKIDR HFMCDIDSDK VKQQFVLSIK NIAQELGCKV
IAEGVETANE FRFIEKIGLR FCQGYYFKRP APLPVRRINN NLFSERRLTA QSKNRLISSK
MVGELLQPID AISTATTIES CATLFKQKPD LDSIPVLENN KPIGLIHRNN LTNLFFSAYG
RELSGRKTIA SLVDRQVLIL EHDLPVEQAS ILISDQAGRR KILEFIIVNK GEYQGIGSII
DLLKEITHLQ INNARYANPL TLLPGNVPIS KNLDQRLKEQ SPFTICYVDL DHFKPYNDCY
GYEKGDQIIL GVADILRDIV TDRDDFIGHI GGDDFIVILS SDHWQIQCEK ILANFSEWVI
HSYSPEDQER GGIASEDRTG AKQFYPLLSL SIGCVNLSPS ICNSHNDVAV LASYAKSKAK
KIKGNSLYLY DSKTTANALP EKKYLTELCH SS
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