Gene Ping_2378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2378 
Symbol 
ID4624031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2894400 
End bp2895251 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content46% 
IMG OID639797516 
Productphosphomethylpyrimidine kinase 
Protein accessionYP_943714 
Protein GI119946034 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 
TIGRFAM ID[TIGR00097] phosphomethylpyrimidine kinase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAACC TTAGTGCAAC TTCTACTGCT CAAAATTCAT CAACGCCTAT CGTGCTGACT 
ATTGCCGGAT CCGACAGTGG TGGTGGAGCA GGTATTCAAG CCGATATTAA AGCCATTTCA
GCAACGGGCG GTTACGCCTG TTCTGTGATC ACTGTGATTA CCGCTCAAAA CACCCTTGGG
GTGTCCGCTA TTTTCCCTAT TCCCCTTGAA CATATAGAAA AGCAACTTGA TGCGGTTTTT
AGCGATCTGA ATGTGGTTGC TGTTAAGGTT GGGATGTTGG CTGATTGCGA CATAATCAAA
CTCGTGGCAG CAAAAATAAG ACAGTATCGT CCTGCCTTTT TAGTGGTTGA TCCGGTGATG
ATCGCAACCA GCGGAGACTT ATTGCTGAAA GCATATTCGA TTAGTACACT GAAATCGGAA
CTGCTTCCTC TTGCAGATCT TATCACGCCT AATCTGCCCG AAGCGGCGGA ATTGATTTCT
TCAGATGTGC CAACCAATAA AGAGGGCATG GAGAAGATGA TCGGCAAACT CCGTAAATTG
AAATTTAATG CGCTGCTGCT TAAAGGGGGG CATTTGATTG ATGATGAAAA TAGTAATGAT
CTGCTTATCC TACCTAATCA TGTTGAACAG TTAAACGCCA TCCGTATCAA TACGCTTAAT
ACCCATGGTA CAGGTTGCAC ACTTTCGTCG GCAATCGCCT CCTATCTGGC GCAGGGTAAT
GATCTTTTAC GTGCGGTGCA GCTGGGCAAA GACTATATTT CGCAAGCGAT CGCGCATGCC
GACGAATTAG ATGTCGGGCA GGGTCATGGC CCGGTAAACC ATTTCTTTGT CGGACATGCG
AATGTCCGTT AG
 
Protein sequence
MSNLSATSTA QNSSTPIVLT IAGSDSGGGA GIQADIKAIS ATGGYACSVI TVITAQNTLG 
VSAIFPIPLE HIEKQLDAVF SDLNVVAVKV GMLADCDIIK LVAAKIRQYR PAFLVVDPVM
IATSGDLLLK AYSISTLKSE LLPLADLITP NLPEAAELIS SDVPTNKEGM EKMIGKLRKL
KFNALLLKGG HLIDDENSND LLILPNHVEQ LNAIRINTLN THGTGCTLSS AIASYLAQGN
DLLRAVQLGK DYISQAIAHA DELDVGQGHG PVNHFFVGHA NVR