Gene Ping_2374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2374 
Symbol 
ID4623708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2891153 
End bp2891833 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content45% 
IMG OID639797512 
Producttranscriptional activator 
Protein accessionYP_943710 
Protein GI119946030 
COG category[K] Transcription 
COG ID[COG0819] Putative transcription activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCATC AAGATTTAAT TAATGCATGT GGCAAGGATT GGAATGCCTA CACTAAACAT 
GCCTTTGTAC GGCAATTAGC AAAAGGCACG TTAGCGCAGC CCTGCTTTTT ACATTACCTG
AAACAAGATT TTTTGTTTCT TAAGCAATAT GCACGTGCTT ATGCGCTGGC TATTTACAAA
GCGCGCACCT TAGCTGATAT GCGTAAAGCG CTGCCTAGCG TACATGCATT ACTGGACGTT
GAAATCGACC ACCACGTAAG TTATTGCGCT AACTGGGGAC TGACTGAATC GGATTTGGAA
GCAGAAGATG AAGATTTTGG TACGGTTGCC TATACGCGTT ATGTGCTCGA TGCGGGCATG
CAAGGCGATA TAGTTGATTT ATACGCGGCG CTAGCACCAT GCTTTATTGG TTATGCAGAA
ATAGGGCGTA ACCTCTGCAA CGATCAAAAC ACCCACCGGG AAGGTAATCC ATTTGAGAAT
TGGATTGCAC TTTATGGCGG TGATGAATTC CAGCAAGGCG TTGCGCAGGG CACTGAACAT
ATTGATGCAT TACTCGCTGA TATTGATTTA AACAGTTCGC GCGGCCGGGA ACTTATTCGC
GTATTTAGAA CCGCAACTCG AATGGAAATT GCTTTTTGGG AGCAAGGGTT GAATGCGGCA
GAGTCTGTCC CTTTAAATTG A
 
Protein sequence
MNHQDLINAC GKDWNAYTKH AFVRQLAKGT LAQPCFLHYL KQDFLFLKQY ARAYALAIYK 
ARTLADMRKA LPSVHALLDV EIDHHVSYCA NWGLTESDLE AEDEDFGTVA YTRYVLDAGM
QGDIVDLYAA LAPCFIGYAE IGRNLCNDQN THREGNPFEN WIALYGGDEF QQGVAQGTEH
IDALLADIDL NSSRGRELIR VFRTATRMEI AFWEQGLNAA ESVPLN