Gene Ping_2325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2325 
Symbol 
ID4627111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2826154 
End bp2826651 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content38% 
IMG OID639797466 
Productbeta-Ig-H3/fasciclin 
Protein accessionYP_943665 
Protein GI119945985 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2335] Secreted and surface protein containing fasciclin-like repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAACA AAATATTAAC TATTGGTGCG TTACTAATGA GCAGTTTGAT TTTTATGCCT 
TTGGCACAAG CAAACAGTCA TGTCATGAAA AAAGATATTG TTGATGTGGC TGTTGAAAAT
GGTTCGTTTA CAACCCTTGT TGCAGCATTA AAAGCAGCTG AATTGGTGGA TACTTTAAAA
GGTAAAGGAC CTTTCACTGT GTTTGCACCA ACTGACGAGG CATTTGCTAA ATTACCTGAA
GGCACGTTAG AAATGTTACT AATGCCTGAA AACAAAGAAC AGTTGGTTTC AATACTAACC
TACCATGTAG TTGCCGGCAA AGTAATGGCT AAAGATGTAA TGAAACTCGA CAGTGCAACA
ACTATTCAGG GACAAGATGT TATGGTGCAC ATCATGGACG GTAAAGTAAT GATAGACGAT
GCTACCGTAG TGATAGCTGA TGTCAAAGCA AGCAATGGCG TTATCCATGT AATAGACAGT
GTGATTTTAC CAAAATAA
 
Protein sequence
MLNKILTIGA LLMSSLIFMP LAQANSHVMK KDIVDVAVEN GSFTTLVAAL KAAELVDTLK 
GKGPFTVFAP TDEAFAKLPE GTLEMLLMPE NKEQLVSILT YHVVAGKVMA KDVMKLDSAT
TIQGQDVMVH IMDGKVMIDD ATVVIADVKA SNGVIHVIDS VILPK