Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2279 |
Symbol | |
ID | 4626808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 2767511 |
End bp | 2768455 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639797420 |
Product | dihydrouridine synthase, DuS |
Protein accession | YP_943619 |
Protein GI | 119945939 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAATAA CACTTGCCCC GATGGAGGGC GTCATGGATC ACCAGATGCG CCAATTGTTA ACGGCAATTG GTGGTTATGA TCTCTGCATT ACCGAATTTA TTCGCGTTGT TGATATGCAA CTCCCGGCAA AAGTATACCG CCGTCATAGC CCGGAACTGT ATAACGACAG TAAAACTGCC TCCGGCACCC CGGTACGCAT TCAATTATTA GGTCAAAACC CGCAATGTTT AGCAGAAAAT GCGCATCAAG CCATCAGTAT CGGCTCCGAT GGTATTGATC TTAATTTTGG TTGCCCTGCA AAAACGGTTA ATAAAAACAA AGGGGGCGCC GTGTTATTAA AATCACCGGA AGCCTTATAT CAAATTGTGA CCGAGGTACG TAAAGCGGTG CCCGTATTTC AAACGCTCAG CGTCAAAATA CGACTGGGTT ATGAGGATAA GTCTCTCGCA ATTGAAAACG CGCAGGCGAT CCAAGCCGCA GGGGCCGATG AACTTGCGGT GCATGCCCGC ACGAAGGCAG AAGGTTACCG CCCGCCCGCC CACTGGCATT GGATAGCTAA AATTAAAGAT GCGATCACTA TTCCCGTGAC AGCAAATGGT GATATTTTCT CTGTTGATGA TGCCAAGCGT TGCATGGAAA TAACCGGTTG TGAGCGATTA ATGATCGGCC GGGGTGCCCT GGCAACACCC AACTTAGCAC AAGCAATTAA AGGGATTGAA TCTCCTAATA GCTGGCCAGA GATTTTGAAT ATACTGGAAA AATATATGTT TGTTCAAACT CACGGCGATC AGGAAAAATA TTTACCCAGT CGCATTAAAC AATGGTTAAT ATTTATAAAA GCGCAACATC CGCAGGCTGC TGTTTTCCTT CAGCAGGTGC GCACTATTAA AACAACCCAA GAAATGTTGG CGGCGATCAA TCAAGAGCAG TTAAGGTTTA AATAA
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Protein sequence | MQITLAPMEG VMDHQMRQLL TAIGGYDLCI TEFIRVVDMQ LPAKVYRRHS PELYNDSKTA SGTPVRIQLL GQNPQCLAEN AHQAISIGSD GIDLNFGCPA KTVNKNKGGA VLLKSPEALY QIVTEVRKAV PVFQTLSVKI RLGYEDKSLA IENAQAIQAA GADELAVHAR TKAEGYRPPA HWHWIAKIKD AITIPVTANG DIFSVDDAKR CMEITGCERL MIGRGALATP NLAQAIKGIE SPNSWPEILN ILEKYMFVQT HGDQEKYLPS RIKQWLIFIK AQHPQAAVFL QQVRTIKTTQ EMLAAINQEQ LRFK
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