Gene Ping_2277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2277 
Symbol 
ID4626806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2764117 
End bp2766441 
Gene Length2325 bp 
Protein Length774 aa 
Translation table11 
GC content42% 
IMG OID639797418 
ProductDNA polymerase III, subunits gamma and tau 
Protein accessionYP_943617 
Protein GI119945937 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTTATC AAGTTTTAGC ACGAAAATGG CGACCAGGTA ATTTCCAGGA AGTGGTTGGC 
CAGCAACATG TGTTGACCGC TTTATCTAAT AGTTTGGCGC AAAACAGATT ACACCATGCT
TATCTGTTCA GTGGTACCCG CGGTGTAGGT AAAACGACCA TTGCACGTAT TTTGGCAAAA
AGCCTGAATT GTGAAAAGGG GGTGACGGCA ACACCCTGTG GCGCATGTGT ACATTGTCAG
GCTATTGATC AGGGGCGTTT TGTTGATTTA TTAGAAATAG ATGCCGCTTC CCGTACTAAG
GTCGATGATA CGCGTGAAAT GCTTGATAAT GTTCAATATA AACCTGCACA GGGGCGTTAT
AAAGTTTATC TTATTGACGA AGTGCATATG CTCTCCAAGC ACAGCTTTAA TGCTTTGCTA
AAAACATTGG AAGAGCCGCC TGAATATGTG AAGTTTTTAT TAGCCACGAC AGACCCACAA
AAATTACCCA TTACGGTATT ATCTCGTTGT CTACAATTTC ACTTAAAAGC GATTTTGCCG
CAAGAAATTG AAACCCAATT AGCTTATATT CTGAACCATG AGCAGGCGAC GTTTGAGCAT
GCTGCGCTGA CTGTTATTGC CACGGCAGCA GAGGGCAGTA TGCGGGATGC GTTAAGTTTG
ACTGACCAGG CACTGGCTTT TGGCTCTGGC CACATTGCAT ACCAGTCTGT ATTAAAGATG
CTTGGCTCTA TTGACAACAA TCATTTGCAT TATTTATTAC ACTTTATTGC TTCCGGAAAT
GTTTCAAAAG TCTTCCTGAA AATAGATGAA TTTGTGCATC TTGGGGCAGA TTTTGCCATG
TTACACCAAA CCTTAGCCAG TTTGTGTCAT GAAATTGCAC TATCACAGAT GCAGCCTAAA
CAGAATGTAA CCCAAAAATC TGCCGTACAA TTATTAGCAG AACGTTTAAC GCCCGAAGAG
GTGCAGCTTT ATTATCAAAT TGCTGTTCAG GGCTATAAAG ATTACGCTTT TGCACCTAAC
GGTAAAATTG CTTTTGAGAT GACGGTGATG CGTCTGCTTG CCTTTAAACC CGCAAATTAT
ATCAGTTTGG ATGAGCGGCA ACTTGGTAAT CCGAATAGCG CGGAAGCAAG TGATGCGCAG
CAGAGTAATA TCGCAGCGGC TTCAGAATCG GTCGAATCTG TAGAAATAGC AGAAGCCCCT
GTGATAGAAA ACTTGCAGCA AAACCCGGCA GCGTCGCAAA TAGTGCAACA GGAGCCTAAA
AGCGCAGATT CAGTTCAGTC GACGTCTCCC TCTGTCGAGC CATTACAGAG ATCAGCTGCG
TCTTCGGTGC CGCCCCCAAT TGAAAGACAA CCAGAGCCGC AGCAGAATCA GTCTGCACCG
CCCAGTGAAA AAATAGCACC TGTTGCTGAG GTCTCTCATT CTCGAAATAT GTTACGTAGT
CATAGATTAA AACGAGAAAG CGCAAAAAAG AACCAGGCGA CAACTACTGA ACAACCTGCC
TCAGTTGTCG CATCCGGGGC GGAAAATGTA ACAGCAGAGT TTAAAGCTGA TAAGTATCAG
ATGAGTGGCA TTGATGAGGA TATCAGCAGC ACGCCAGATC TTCAGGGAGT TAATCGAAAC
AATGCTATTG CTGATAATCT ATCAGCAATA CAAGATAATA GGGTCGATCA AGAGATAATC
CCCCTTGAAT CTTATCAGCA GGATCAGTTT GTACCGGATA GTGACAATCA AGAACAGCCG
GCAGACTATC TTAGTCAAAC AATGAGTGCT GATTATGGTG AAAGCCGTGG ACCGGAAAAT
ATCCTGGAGA ATAAGCGGGA GGAAAAAGAA CCTGCTGTTG CGGAGAATAA AGATAAAAGT
AGCACTTTTC TATCAGATAA TATCTTTGTT AATGATGATA TTGAACGAGC GGAAATTGAT
CCCGGCAAAT ATGTGGCAGA CAAATTAAGC GATCCCTGGG CATTAGCTAT TCAGAAAATG
CGCTTAGTCG GTTTAGTGAA GTTATTAGCC AAAAATAGCG TCATGAAAAT AGTTGAACAG
CAAATTGTAT TGACCTTAAA ACCTGAACAA CAACACTTAC TCAATAACCA TCAATTATGC
ACACAATTAG AGACAAAATT AAAAGTTCAT TTTGGGGCGC AAATGAGCAT GTATGTTGAA
GTGGGGCATG TCACTGGCAA GTTAACCGCA TTTGAGTCGG AATTGGCTAT TTATCAAACC
TATTTGAATA ATGCAAAAAC GGCTATTAAA GAAGATCAAA ACATTCTAAC TTTTGTCAGT
GAATACGGCG CAAAGGTCTA CGAAAATAGC ATCATACCGT TATAA
 
Protein sequence
MSYQVLARKW RPGNFQEVVG QQHVLTALSN SLAQNRLHHA YLFSGTRGVG KTTIARILAK 
SLNCEKGVTA TPCGACVHCQ AIDQGRFVDL LEIDAASRTK VDDTREMLDN VQYKPAQGRY
KVYLIDEVHM LSKHSFNALL KTLEEPPEYV KFLLATTDPQ KLPITVLSRC LQFHLKAILP
QEIETQLAYI LNHEQATFEH AALTVIATAA EGSMRDALSL TDQALAFGSG HIAYQSVLKM
LGSIDNNHLH YLLHFIASGN VSKVFLKIDE FVHLGADFAM LHQTLASLCH EIALSQMQPK
QNVTQKSAVQ LLAERLTPEE VQLYYQIAVQ GYKDYAFAPN GKIAFEMTVM RLLAFKPANY
ISLDERQLGN PNSAEASDAQ QSNIAAASES VESVEIAEAP VIENLQQNPA ASQIVQQEPK
SADSVQSTSP SVEPLQRSAA SSVPPPIERQ PEPQQNQSAP PSEKIAPVAE VSHSRNMLRS
HRLKRESAKK NQATTTEQPA SVVASGAENV TAEFKADKYQ MSGIDEDISS TPDLQGVNRN
NAIADNLSAI QDNRVDQEII PLESYQQDQF VPDSDNQEQP ADYLSQTMSA DYGESRGPEN
ILENKREEKE PAVAENKDKS STFLSDNIFV NDDIERAEID PGKYVADKLS DPWALAIQKM
RLVGLVKLLA KNSVMKIVEQ QIVLTLKPEQ QHLLNNHQLC TQLETKLKVH FGAQMSMYVE
VGHVTGKLTA FESELAIYQT YLNNAKTAIK EDQNILTFVS EYGAKVYENS IIPL