| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2264 |
|---|
| Symbol | |
|---|
| ID | 4627193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 2750369 |
|---|
| End bp | 2750968 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639797404 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_943604 |
|---|
| Protein GI | 119945924 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3417] Collagen-binding surface adhesin SpaP (antigen I/II family) |
|---|
| TIGRFAM ID | [TIGR02722] uncharacterized proteobacterial lipoprotein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0680426 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAC AAAAAAATCT ATGGGCAGCC TTGGCGGTTA CTTTTATACT GACCGCCTGT
TCAACATCGG TTGAACGAAT AGATGCTCAA GAGCAAATTG ATTTAAGCGG GGCATGGAAT
GATACTGATT CGCAACTGGT AGCACGGGAA ATGATTGACG ATTCATTGTC TCGCCCCTGG
ATTGTCCAGT TTGTTACCCA AACAGGTAAA GATCCTGCGG TCATTGTGGG GTCAGTTAAA
AACTTAAGCC ATGAGCATAT TAATACTAAT ACCTTTGTTG CTAATATGGA GCGTGAATTA
ATCAATTCGG GCAAAGTGCA ATTTGTCGCT TCAGCGGTTG CGCGTCAAGA AGTCCGTGCG
GAACGTGGCG ATCAAGATTT AAATGCAACA GCCGAGTCTC GTAATGTAGC AAGACAAGAG
TATGGCGCTG ATTTTATGAT GCAGGGACAA ATTAATACTA TTATCGATAT GGAAGGCAAA
ACCCAAGTGC GTTATTATCA GGTGAATTTG GAATTAATCA GCATTAAAGA TAACCGTAAA
GTTTGGGTTG GCGAGAAGAA GATTAAAAAA CTGGTCAGAA ACAGTCGACT ACGCCAGTAA
|
|---|
| Protein sequence | MKTQKNLWAA LAVTFILTAC STSVERIDAQ EQIDLSGAWN DTDSQLVARE MIDDSLSRPW
IVQFVTQTGK DPAVIVGSVK NLSHEHINTN TFVANMEREL INSGKVQFVA SAVARQEVRA
ERGDQDLNAT AESRNVARQE YGADFMMQGQ INTIIDMEGK TQVRYYQVNL ELISIKDNRK
VWVGEKKIKK LVRNSRLRQ
|
|---|
| |