Gene Ping_2216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2216 
Symbol 
ID4623853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2699294 
End bp2699650 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content41% 
IMG OID639797354 
Productribosomal protein L20 
Protein accessionYP_943556 
Protein GI119945876 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0292] Ribosomal protein L20 
TIGRFAM ID[TIGR01032] ribosomal protein L20 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000311515 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.131567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAGAG TTAAACGTGG TGTACAGGCT CGTGCCCGTC ACAAGAAAGT ATTAAAACAA 
GCTAAAGGTT ATTACGGAGC ACGTTCACGT GTTTATCGTG TAGCTGTTCA AGCAGTTACC
AAAGCGGGTC AATACGCTTA CCGTGACCGT CGTCAACGTA AACGTGTATT CCGTCAATTA
TGGATCACGC GTATTAACGC TGCATCTCGT ATTAGCGGTC TATCTTACAG CCGTTTCATC
AATGGTCTGA AAAAGGCTTC TGTTGAAATC GATCGTAAGA TACTTGCTGA TATTGCAGTA
TTTGATAAAG CAACATTTGC TCATTTAGTT GAAGTTGCTA AAAAAGCACT TGCTTAA
 
Protein sequence
MPRVKRGVQA RARHKKVLKQ AKGYYGARSR VYRVAVQAVT KAGQYAYRDR RQRKRVFRQL 
WITRINAASR ISGLSYSRFI NGLKKASVEI DRKILADIAV FDKATFAHLV EVAKKALA