Gene Ping_2200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2200 
Symbol 
ID4625234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2676693 
End bp2677352 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content37% 
IMG OID639797338 
Producthypothetical protein 
Protein accessionYP_943540 
Protein GI119945860 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.581022 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.150789 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCAC CGATCACTAA TACCCGCTCA AAGAGCCATG GTATTGAAAT TAATAAAGTA 
CTTAGAAATA CCTATATGTT GTTGGCTATG ACGCTGGCGT TTTCTGCTTT AACGGCAACG
TTAGCAACGA TGATGCAAAT TGGTCCAACC GCATCTTTAG TGCTTATGCT TGTGGGTTTT
GGCACATTAT TTATCGTATC TAAAAATGCA AATTCCAGTA AAGGGATCTT TTGGGTCTTC
ATCTTTACCG GCGTAATGGG CGCATCACTG GGTAATATGC TAAACCATTA TTTAGCAATG
GAAAATGGCG CAGCACTTAT AATGCAGGCA CTAGGTTCAA CTGCTATTAT TTTCTTTGCC
CTGTCAGCTT ATGTATTAAC AACGCGCAAA GATTTTTCAT TTATGGGCGG CTTTTTAATG
GCGGGTATGA TTGCTGTTAT TATCGCAATG GTTGCAAATA TCTTTTTACA AATACCCTTG
ATGCAAGTTG TCATTAGCAG TGTTGTTGTC TTAATTATGT CCGGCATGAT CCTTTTTGAT
ACGAGTCGTA TTATCAACGG TGGAGAGACT AATTACATCA ATGCAACCGT ATCGTTATTC
TTAAACTTAT TTAATATGTT TATTCATCTA CTGGTTTTAT TAAACATTTT AGATGACTAA
 
Protein sequence
MNSPITNTRS KSHGIEINKV LRNTYMLLAM TLAFSALTAT LATMMQIGPT ASLVLMLVGF 
GTLFIVSKNA NSSKGIFWVF IFTGVMGASL GNMLNHYLAM ENGAALIMQA LGSTAIIFFA
LSAYVLTTRK DFSFMGGFLM AGMIAVIIAM VANIFLQIPL MQVVISSVVV LIMSGMILFD
TSRIINGGET NYINATVSLF LNLFNMFIHL LVLLNILDD