Gene Ping_2092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2092 
Symbol 
ID4627014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2547389 
End bp2548141 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content39% 
IMG OID639797237 
Productglycerophosphodiester phosphodiesterase 
Protein accessionYP_943439 
Protein GI119945759 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.275875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.276307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAA CAGCGCATAG AGGAGGTTCT AGTCTGGCGC CAGAAAATAC TCTGGCAGCT 
TTTAATAAGG CAGCTGAACT GGGTTGTGAG TGGATTGAAA TTGACGTCCA GCTGAGTATA
GATGAGGTTC CTGTTGTTAT TCATGATCAA ACAGTTGAAC GCTGTACCGA TGGCAGTGGT
GCTGTGTCAT CCATGACTTT AGACAGCCTG AAATCACTGG ATGCCGGGTT ATGGTTTGGA
GAAGAATTTC GAGATGAACG TATTCCGACT CTGGAAGAAA CGTTATTATT GGCAAGAAAT
ACCAACCTCA ACGTGAATAT TGAGATAAAA CTCTATCGGC AAGATGATCT TGTTCTGCTT
TGTGAAAAAA TCAAAAAAGT TATTATTGAT TTGGACGTGG AAGCATCTCA AATATTATTT
TCGAGCTTTA ATATAGAGGC ATTAAAATAC ATGCAATACC ATCAACCTCA AATTCGCCGG
GGTCTACTGG TAGAAACAAT TCCTGCTAAT GTACTTTTAT TATTAGCTGA AATTGAAGCT
TACAGCCTGC ACTGCAATTA CGTTTTTTTG AAGGAACAAC AAGCAAAATT GATAAAAAAA
AGCGGTTACC AACTTTACTG CTACACCCCT AATTCACCTC AGCAGGTTAG TCAGCATTGG
GATTGGGGGG TCGACATGAT GATCACCGAT GTACCACAAG CCTATATCAA TATTTTGACC
TACGATAAAT TTAAATTAAT AAACTCTAAT TAA
 
Protein sequence
MKITAHRGGS SLAPENTLAA FNKAAELGCE WIEIDVQLSI DEVPVVIHDQ TVERCTDGSG 
AVSSMTLDSL KSLDAGLWFG EEFRDERIPT LEETLLLARN TNLNVNIEIK LYRQDDLVLL
CEKIKKVIID LDVEASQILF SSFNIEALKY MQYHQPQIRR GLLVETIPAN VLLLLAEIEA
YSLHCNYVFL KEQQAKLIKK SGYQLYCYTP NSPQQVSQHW DWGVDMMITD VPQAYINILT
YDKFKLINSN