Gene Ping_2047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2047 
Symbol 
ID4624686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2492792 
End bp2493736 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content41% 
IMG OID639797199 
Producttranscriptional regulator, substrate-binding of LysR family protein 
Protein accessionYP_943401 
Protein GI119945721 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.595043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.109117 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCAC GTCTTCATGC CCATGTTGGC ACAATGAGGC AGCTCGAAAT TTTATTGGCG 
GTGCATGATA AAGGCAGTAT TAATGAAGCT GCAAAAGCGC TTTTTTTAAC TCAACCCACT
GTTTCAATTC AGATGCGCAA ACTCAGCGAT GCGATTGGTG AGCCTTTGTA TCAATTCATA
AACCGTAAGT TGATTTTTAC TGATGTTGGT TTAGAGCTAG TGAAAACTGC TGTAGAGGTG
CTTGATAGTT TTGCTCGTTT AGATATGGCA TTAGGATATA TACGTAAGTT TAAATCTGGT
ACCTTGCGCT TGGCCGTGGT GACAACCTCC AAGTATTTTA TTCCTCACCT TTTAGGGCCT
TTTTGTGAGC AATTTCCCGA TATAGATATC CAGTTAAATA TTGGCAATAG GGAGAAAACG
ATTGAACGGA TGAAACAAGG CGTGGATGAT TTTTATGTAT TTAGTCATCC GCCTCAGGAT
ATTGATGCGC AAAGCCTAGA GTTGTTAGAT AACCCTTTAG TGGCGATTGC CCATCAAGAC
CATCCTTTAG GTAAACAGGC GTCAATTAGT TTGGCAGATC TGTGTGAGGT GCCCTTTTTA
ATGCGGGAGA AAGGCTCAGG TACCCGTTAC GCTATTGAGG CTTTGTTTAA ACAGCATAAG
TTACAACCGA ATATAAAAAT GACCATTGAA AGTAACGAGG CGATTAAACA TGCCGTTATG
TCTAAATTAG GGATCTCTAT TATTTCTGCT CACACACTTA CCTATGGTGG GCAAAGCGGA
TTAGTGCGCT TACCTGTAAA AGAGTTGCCA ATAGATTCTC ATTGGTTTTT TATGTGGTCA
ACATCTAAAC GACCCACTTT AATCGCTTCT GCCTTTTTAA AACATATTGA ATCGAACGGC
AGGGAATTGC TGCAAGATGA ACTTGATAAA AGTGGTCTGG GTTAA
 
Protein sequence
MQSRLHAHVG TMRQLEILLA VHDKGSINEA AKALFLTQPT VSIQMRKLSD AIGEPLYQFI 
NRKLIFTDVG LELVKTAVEV LDSFARLDMA LGYIRKFKSG TLRLAVVTTS KYFIPHLLGP
FCEQFPDIDI QLNIGNREKT IERMKQGVDD FYVFSHPPQD IDAQSLELLD NPLVAIAHQD
HPLGKQASIS LADLCEVPFL MREKGSGTRY AIEALFKQHK LQPNIKMTIE SNEAIKHAVM
SKLGISIISA HTLTYGGQSG LVRLPVKELP IDSHWFFMWS TSKRPTLIAS AFLKHIESNG
RELLQDELDK SGLG