Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2047 |
Symbol | |
ID | 4624686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 2492792 |
End bp | 2493736 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639797199 |
Product | transcriptional regulator, substrate-binding of LysR family protein |
Protein accession | YP_943401 |
Protein GI | 119945721 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.595043 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.109117 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATCAC GTCTTCATGC CCATGTTGGC ACAATGAGGC AGCTCGAAAT TTTATTGGCG GTGCATGATA AAGGCAGTAT TAATGAAGCT GCAAAAGCGC TTTTTTTAAC TCAACCCACT GTTTCAATTC AGATGCGCAA ACTCAGCGAT GCGATTGGTG AGCCTTTGTA TCAATTCATA AACCGTAAGT TGATTTTTAC TGATGTTGGT TTAGAGCTAG TGAAAACTGC TGTAGAGGTG CTTGATAGTT TTGCTCGTTT AGATATGGCA TTAGGATATA TACGTAAGTT TAAATCTGGT ACCTTGCGCT TGGCCGTGGT GACAACCTCC AAGTATTTTA TTCCTCACCT TTTAGGGCCT TTTTGTGAGC AATTTCCCGA TATAGATATC CAGTTAAATA TTGGCAATAG GGAGAAAACG ATTGAACGGA TGAAACAAGG CGTGGATGAT TTTTATGTAT TTAGTCATCC GCCTCAGGAT ATTGATGCGC AAAGCCTAGA GTTGTTAGAT AACCCTTTAG TGGCGATTGC CCATCAAGAC CATCCTTTAG GTAAACAGGC GTCAATTAGT TTGGCAGATC TGTGTGAGGT GCCCTTTTTA ATGCGGGAGA AAGGCTCAGG TACCCGTTAC GCTATTGAGG CTTTGTTTAA ACAGCATAAG TTACAACCGA ATATAAAAAT GACCATTGAA AGTAACGAGG CGATTAAACA TGCCGTTATG TCTAAATTAG GGATCTCTAT TATTTCTGCT CACACACTTA CCTATGGTGG GCAAAGCGGA TTAGTGCGCT TACCTGTAAA AGAGTTGCCA ATAGATTCTC ATTGGTTTTT TATGTGGTCA ACATCTAAAC GACCCACTTT AATCGCTTCT GCCTTTTTAA AACATATTGA ATCGAACGGC AGGGAATTGC TGCAAGATGA ACTTGATAAA AGTGGTCTGG GTTAA
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Protein sequence | MQSRLHAHVG TMRQLEILLA VHDKGSINEA AKALFLTQPT VSIQMRKLSD AIGEPLYQFI NRKLIFTDVG LELVKTAVEV LDSFARLDMA LGYIRKFKSG TLRLAVVTTS KYFIPHLLGP FCEQFPDIDI QLNIGNREKT IERMKQGVDD FYVFSHPPQD IDAQSLELLD NPLVAIAHQD HPLGKQASIS LADLCEVPFL MREKGSGTRY AIEALFKQHK LQPNIKMTIE SNEAIKHAVM SKLGISIISA HTLTYGGQSG LVRLPVKELP IDSHWFFMWS TSKRPTLIAS AFLKHIESNG RELLQDELDK SGLG
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