Gene Ping_2042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2042 
Symbol 
ID4624602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2488481 
End bp2489173 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content37% 
IMG OID639797196 
Producttransposase, IS4 family protein 
Protein accessionYP_943398 
Protein GI119945718 
COG category[L] Replication, recombination and repair 
COG ID[COG5433] Transposase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00132937 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.19233 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAAA TAACCTTGAT AAACCAGCTC TCAATCATCC GTGATACCCG ACAACCGAGG 
AAAGTGCATC ACAATTTAGT TGATGTTTTA TTTTTGGCAA TTACAGCCGT CATATCGGGC
TGTGAGGGTT GGGAAGAAAT ACAAGATTTC GGCAACGATA AGTTAGATTG GCTGAGAAAG
TATTTACCAT TTTCAGGCGG AATACCTACG GACGACACAA TTTCTCGTAT TTTTCAGTTG
ATTGACCCAA AAGAATTTCA AAAGTGCTTT GCTACTTGGA TGAAAAGTTG CTGTGAAATG
AGTCATGGAG ATGTCATTGT TATTGATGGA AAAACATTAA GAGGTTCATT TAATAAGAAA
GATAAATCAG ATACTATTCA TATGGTTAGT GCTTTTGCAG CCGCTAATTC GGTTGTGTTA
GGGCAAGTTA AGACAAATGC TAAGTCTAAT GAAATTACAG CGATTCCTAA GTTATTAGAT
TTATTGGATG TACGTGGATG CCTCGTAACT ATTGATGCAA TGGGATGCCA AACTAAAATA
GCTAAAAAAA TCGTAGATAA AGGTGGTGAT TATCTTTTTC CTGTTAAAGG TAACCAAGAA
CGATTACAAA CAGCATTAGA CGGTATATTT TCAATTGGCC GATTAGAGTT ACCAGAAACA
GAAGTCTATA CGACTAAAAA AAAGGCAGGG TAA
 
Protein sequence
MSQITLINQL SIIRDTRQPR KVHHNLVDVL FLAITAVISG CEGWEEIQDF GNDKLDWLRK 
YLPFSGGIPT DDTISRIFQL IDPKEFQKCF ATWMKSCCEM SHGDVIVIDG KTLRGSFNKK
DKSDTIHMVS AFAAANSVVL GQVKTNAKSN EITAIPKLLD LLDVRGCLVT IDAMGCQTKI
AKKIVDKGGD YLFPVKGNQE RLQTALDGIF SIGRLELPET EVYTTKKKAG