Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2042 |
Symbol | |
ID | 4624602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 2488481 |
End bp | 2489173 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639797196 |
Product | transposase, IS4 family protein |
Protein accession | YP_943398 |
Protein GI | 119945718 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5433] Transposase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00132937 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.19233 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCAAA TAACCTTGAT AAACCAGCTC TCAATCATCC GTGATACCCG ACAACCGAGG AAAGTGCATC ACAATTTAGT TGATGTTTTA TTTTTGGCAA TTACAGCCGT CATATCGGGC TGTGAGGGTT GGGAAGAAAT ACAAGATTTC GGCAACGATA AGTTAGATTG GCTGAGAAAG TATTTACCAT TTTCAGGCGG AATACCTACG GACGACACAA TTTCTCGTAT TTTTCAGTTG ATTGACCCAA AAGAATTTCA AAAGTGCTTT GCTACTTGGA TGAAAAGTTG CTGTGAAATG AGTCATGGAG ATGTCATTGT TATTGATGGA AAAACATTAA GAGGTTCATT TAATAAGAAA GATAAATCAG ATACTATTCA TATGGTTAGT GCTTTTGCAG CCGCTAATTC GGTTGTGTTA GGGCAAGTTA AGACAAATGC TAAGTCTAAT GAAATTACAG CGATTCCTAA GTTATTAGAT TTATTGGATG TACGTGGATG CCTCGTAACT ATTGATGCAA TGGGATGCCA AACTAAAATA GCTAAAAAAA TCGTAGATAA AGGTGGTGAT TATCTTTTTC CTGTTAAAGG TAACCAAGAA CGATTACAAA CAGCATTAGA CGGTATATTT TCAATTGGCC GATTAGAGTT ACCAGAAACA GAAGTCTATA CGACTAAAAA AAAGGCAGGG TAA
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Protein sequence | MSQITLINQL SIIRDTRQPR KVHHNLVDVL FLAITAVISG CEGWEEIQDF GNDKLDWLRK YLPFSGGIPT DDTISRIFQL IDPKEFQKCF ATWMKSCCEM SHGDVIVIDG KTLRGSFNKK DKSDTIHMVS AFAAANSVVL GQVKTNAKSN EITAIPKLLD LLDVRGCLVT IDAMGCQTKI AKKIVDKGGD YLFPVKGNQE RLQTALDGIF SIGRLELPET EVYTTKKKAG
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