Gene Ping_2040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2040 
Symbol 
ID4624600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2486038 
End bp2487138 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content33% 
IMG OID639797194 
ProductUDP-galactopyranose mutase 
Protein accessionYP_943396 
Protein GI119945716 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0562] UDP-galactopyranose mutase 
TIGRFAM ID[TIGR00031] UDP-galactopyranose mutase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00394808 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0793604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATACG ATTTTTTAAT TGTAGGCTCA GGCCTTTTTG GTTCTGTGTG TGCACATGAA 
TTAACAAAGC GGGGTAAAAA AGTACTCGTT TTAGAAAAGC GAAATCATAT CGGTGGTAAT
ATTTATACTG AAAACAATGA TGGCATCCAA GTTCATAAGT ATGGTGCGCA CATATTTCAT
ACAAACGATA AAGAAATTTG GGATTACGTA AATAGTTTTG TTGAATTTAA TCGCTTTACA
AACTCCCCAT TGGCAAACTA TAAAGGTGAT TTATTTAATC TACCTTTTAA TATGAATACG
TTTTATCAAC TATGGGGAAC AAAAACTCCC GAAGAAGCAA AAGCTAAAAT ATCCGAACAA
CGTAAAGAAA TGGATGGTAA AGAACCATCT AATTTAGAAG AACAAGCCAT CTCTCTAGTT
GGTAGGGATA TTTACGAAAA ACTGATAAAA GGTTATACAG AAAAGCAATG GGGTAGAGAT
TGCAAAGACT TGCCTGCTTT CATTATTCGA CGATTGCCTG TCCGTTTTAC CTATGACAAT
AATTATTTCT CTGATAATTA TCAAGGTGTA CCAGTAGGTG GTTATACGAA GTTAATTGAA
AAAATGCTTG AAGAAGTCGA GGTTCGTTTA AATGTCGATT TCCTTAAAGA TAAAGAATGT
TATCAAGCTT TAGCTGATAA TATAATTTAT ACGGGCCCAA TTGATGAGTA TTTCGCAAAC
AAGTTAGGGA AATTGGAGTA TCGGTCTTTA AAGTTTAAAA CTAAAACATT ACAACAAGAC
AATTTCCAAG GCAATGCTGT TATAAATTAT ACCGAGCGTG ACATTCCTTT CACACGTATT
ATAGAACATA AACATTTTGA TCCAGTTGAT ACCAAACATA CAGTAGTAAC TGAAGAATAT
CCTTGTGAGT GGAAAGAAGG TGATGAACCT TATTACCCTA TAAATGATGA AAGAAACATG
GCACTGTTTA AAAAATATAG AGAGTTGTGT AAGGCTGAAA ATATTATATT TGGTGGGCGC
TTAGCGGAGT ATAAATATTA TGATATGCAT CAAGTTATAA AGTCGGCTCT TAATCTTGTT
AATAAAATTA AGGAAAATTG A
 
Protein sequence
MKYDFLIVGS GLFGSVCAHE LTKRGKKVLV LEKRNHIGGN IYTENNDGIQ VHKYGAHIFH 
TNDKEIWDYV NSFVEFNRFT NSPLANYKGD LFNLPFNMNT FYQLWGTKTP EEAKAKISEQ
RKEMDGKEPS NLEEQAISLV GRDIYEKLIK GYTEKQWGRD CKDLPAFIIR RLPVRFTYDN
NYFSDNYQGV PVGGYTKLIE KMLEEVEVRL NVDFLKDKEC YQALADNIIY TGPIDEYFAN
KLGKLEYRSL KFKTKTLQQD NFQGNAVINY TERDIPFTRI IEHKHFDPVD TKHTVVTEEY
PCEWKEGDEP YYPINDERNM ALFKKYRELC KAENIIFGGR LAEYKYYDMH QVIKSALNLV
NKIKEN