| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2019 |
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| Symbol | lacZ |
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| ID | 4624702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 2457541 |
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| End bp | 2460648 |
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| Gene Length | 3108 bp |
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| Protein Length | 1035 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639797180 |
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| Product | beta-D-galactosidase |
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| Protein accession | YP_943382 |
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| Protein GI | 119945702 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0466092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGAGT TTTCAGAAAT AATTAAGGCC CGTGACTGGG AAAACCAAGA GGTAACGCAC
CAACATGTTG TTCAAGCACA TGCCCCTTTA CATGCTTTCC ACTCAAAACA GGCCGCACTT
GATAATCAAG CTTCAGAATT TCAACAATTA TTAAACGGCC AATGGCGCTT TCAGTTATTT
GCTAAACCGG AAGCAGTCCC CAATCATTGT ATTAACATTG ATTTTGATGA TAGCGCCTGG
TCTGATATCA CTGTACCAAG TAACTGGCAG CTGCAGGGTT ACGATAAGCC TATTTATACC
AATGTGAAAT ATCCCTTTGC AGATAATCCA CCTTTTGTCC CTGCTGATAA TCCGACCGGC
GTATACCGCT TAAATTTCAC TTTGCCAACT GCCTGGAAAG AACGTAAAAA CACGGTCATT
TTTGATGGAG TCAACTCGGC TTTTCACCTT TGGTGTAATG GTATTTGGGT CGGTTATTCT
CAAGACAGTC GTTTACCCGC AGAATTTGAT TTAAGCTGCC ATCTGCAGGC GGGAGACAAT
CAGTTAACCG TGATGGTATT GCGTTGGTCC GACGGCTCCT ACCTTGAAGA TCAGGATATG
TGGTGGTTGA GTGGTATTTT TCGCGATGTT TGCCTGCTCA GTAAACCGCT TATCTCTATT
CGCGATATTA CCGTTAGCAC AGAGTTAGAT GCCTGCTTTA ATCATGGCAG TATCAATGTA
GTGACTCAAC TGAGTGAACA AAGTAGCCAA TACACTGCTC AGGTACAGCT ATTTGATGCG
CAATTACAGC CCGTTACTAA GCTTGTCGGC GCACCCTTTG GGGAGCGCAT GATTGACGAG
AAAGGCCCGG CAAACGATCG AGCCGAACAT AAAATTGCAG TACCATCACC GCATAAATGG
AGTTCAGAAT CGCCTTATTT ATATCGTGTG GTTATTTCCC TGGTCGATAA TGAGGGCCAA
GTTGTCGACA GTGAAGCTTA TCAAGTCGGT TTTCGTGTTG TTGAAATGAG TAATGGCCAG
CTTAAACTTA ATGGTGAAGC ATTATTAATT CGCGGCGTTA ACCGTCACGA GCATCATCCG
GAAAAAGGTC ATGCGATTTC TTATGAAGAT ATGCTTGTAG ATATTAAGCT GCTTAAACAA
AACAATTTCA ATGCGGTGCG CACTGCGCAC TATCCTAATC ACCCGCTATG GTATGAATTG
TGCGATCAAT ATGGTTTGTA TGTTGTTGAT GAGGCCAACC TTGAAACCCA TGGACAATTT
CCAATGTCAC GTTTGTCCAA TGATCTTAGC TGGTTAAATG CGTATATGCG CCGCATGACA
CGAATGGTTG AGCGTGATAA GAACCACCCT TCTATTATTA TATGGTCATT AGGTAATGAA
TCCGGTCTTG GTCATCATCA TCATGCCATG TATCAGTGGA CTAAACGCAG AGATCCAACC
CGCCCTGTGC AGTATGAAGG TGGCGGTGCA GACACGGCTG CCACGGATAT TATCGTGCCT
ATGTATGCCC GCGTCAATAA AGACATCACC CTGCCTAATG CCCCCGATGT GGTGCCTAAA
ATGGCGATTA AAAAATGGCT GTCGATGCCC AATGAACAGC GCCCTTTGAT CCTCTGTGAA
TATGCACATG CCATGGGCAA CAGCTTAGGC AGTTTTGATA AATATTGGCA GGCCTTTCGT
GAATATCCCC GTCTGCAGGG CGGATTTATT TGGGACTGGG TTGATCAGGG TTTAACTAAA
ATCGATGACA ATGGGGATAA TTACTGGGCA TACGGAGGGG ATTTTGGCGA TCAAATCAAC
GATCGACAAT TTTGTATTAA TGGCCTTGTT TTCCCTGACA GAAGTCTACA CCCGACCGTT
TATGAAGCCA AAAAAGCGCA GCAATTTTAT CAATTTAGCC TGGTTGATGG TGATCAGCTC
AAGGTTAAAA TCGACAGTGA AAATTTATTT ATCGAAAGTA TGGATGAAAC ACTTTGCTGG
TCGGTCACCG AAGCGGGTTA TGTTATCGCC TCGGGTGAGA TGGAATTACA TGTCACAGCT
CAAAGTTCAA AGATTTTAAC CTTACTTGAA AGCTACCCCG AACAAAAAAT AGGCTGTGAC
TATTTCCTTA ATATTGAAAT TGTATTAAAT AAGGATAAAC CCTGGGCTAC GAAAGGTTTT
GTTGTTGCCA CTGAGCAAGT TGCATTAGCA TCGATTGCAC AATTGACGAA TGTGCCCTTG
ATTGAGTCAG GTGCGCCGAG ACTGAGCGAA GACAAAAACA AGATAACCGT GGCAGGTACA
GGTTCCGGCG CAGAATTTGA GCTTGAAATA GACAAACAGC AAGGTGTGAT CAGTCAATGG
TTAGTGCGCG GTGAAAATAA AATTTTACAG GGACCCAAGG ATAACTTTTT CCGTGCGCCT
CTGGATAATG ATATTGGTAC CAGTGAGGCT GACTGTATTG ATCCAAATGC GTGGGTGACA
CAATGGGACA CGGCAGGAAT AGCGAATCTG GTGCCTCACT GTATCGCGAT AGAGGCGGTT
ACCTTGGCCC GGAGTGTGCT TGTTAAGGTG GAGTTTGGTC ACTACGTTGA GAATAAGCTA
TTAATTTCCA GTCACTGGCA ATACACCATA AATAACCAGG GAGAAGTACA GATTGATGTT
AATGTTAATC TTGCTAAATC ACTATCACCG TTACCACGAA TTGGGCTGGA ATTGATTCTG
CCTGATAGTG AAAAGCCAGT TAATTGGTTT GGTCGTGGCC CCCATGAAAA TTATCCCGAT
AGGATTTTAT CTGCACACAT TGCTCGCCAT TGCTGCTCTA TTGAAGAAAT GCATACGCCT
TATATTTTCC CGTCTGAAAA CGGTTTACGT TGTGATGTAA AGGATGCAAT AGTTGGCGAT
TTAACCGTAT CAGGTGATTT TCATTTAGCG GTAAGTCGCT ATAGTCAAAT GAATATTGCG
CAGGCCAAAC ACGTTAATGA CCTCATTAAC GACCACCAGC TTTATGTCCG TTTAGATGCT
TTTCATATGG GCGTGGGCGG CGATGATTCC TGGAGTCCAA GTGTGCATGA CGAGTTTCTT
TTAAATAAGG AGCACTATCA TTACCAGATG ATTCTGGCAT TTAATTAG
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| Protein sequence | MREFSEIIKA RDWENQEVTH QHVVQAHAPL HAFHSKQAAL DNQASEFQQL LNGQWRFQLF
AKPEAVPNHC INIDFDDSAW SDITVPSNWQ LQGYDKPIYT NVKYPFADNP PFVPADNPTG
VYRLNFTLPT AWKERKNTVI FDGVNSAFHL WCNGIWVGYS QDSRLPAEFD LSCHLQAGDN
QLTVMVLRWS DGSYLEDQDM WWLSGIFRDV CLLSKPLISI RDITVSTELD ACFNHGSINV
VTQLSEQSSQ YTAQVQLFDA QLQPVTKLVG APFGERMIDE KGPANDRAEH KIAVPSPHKW
SSESPYLYRV VISLVDNEGQ VVDSEAYQVG FRVVEMSNGQ LKLNGEALLI RGVNRHEHHP
EKGHAISYED MLVDIKLLKQ NNFNAVRTAH YPNHPLWYEL CDQYGLYVVD EANLETHGQF
PMSRLSNDLS WLNAYMRRMT RMVERDKNHP SIIIWSLGNE SGLGHHHHAM YQWTKRRDPT
RPVQYEGGGA DTAATDIIVP MYARVNKDIT LPNAPDVVPK MAIKKWLSMP NEQRPLILCE
YAHAMGNSLG SFDKYWQAFR EYPRLQGGFI WDWVDQGLTK IDDNGDNYWA YGGDFGDQIN
DRQFCINGLV FPDRSLHPTV YEAKKAQQFY QFSLVDGDQL KVKIDSENLF IESMDETLCW
SVTEAGYVIA SGEMELHVTA QSSKILTLLE SYPEQKIGCD YFLNIEIVLN KDKPWATKGF
VVATEQVALA SIAQLTNVPL IESGAPRLSE DKNKITVAGT GSGAEFELEI DKQQGVISQW
LVRGENKILQ GPKDNFFRAP LDNDIGTSEA DCIDPNAWVT QWDTAGIANL VPHCIAIEAV
TLARSVLVKV EFGHYVENKL LISSHWQYTI NNQGEVQIDV NVNLAKSLSP LPRIGLELIL
PDSEKPVNWF GRGPHENYPD RILSAHIARH CCSIEEMHTP YIFPSENGLR CDVKDAIVGD
LTVSGDFHLA VSRYSQMNIA QAKHVNDLIN DHQLYVRLDA FHMGVGGDDS WSPSVHDEFL
LNKEHYHYQM ILAFN
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