Gene Ping_2013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2013 
SymbollacI 
ID4627219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2448811 
End bp2449881 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content44% 
IMG OID639797174 
Productlac repressor 
Protein accessionYP_943376 
Protein GI119945696 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.735803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTGA CATTTAAGGA CGTAGCTGAG CTGGCTAACG TATCAACGCA AACTGTTTCG 
CGTGTTACCA ACGGTTCGCT GAACGTTGCC CCTGAAACCA GAGAGAAAGT TAATGCGGCT
ATTAAACAAT TGGGATATAT CCCTAATAAA GGTGCGCAAA TATTAGGGCG GGCAAAGTCA
AAAATGATTG GTCTCGTGAC CCTGGATATT TTGTTACATG GCGCATCATT GCTTGCCAAT
GGTGTGCGTA AGCAGGCAAA AAATCTGGGT TACGGTACTT CCTTATCCGT TATTGCTGAT
CCTGCTATTG ATAAAATAAC GACAGCAGTC GATGATCTCA AAGCGCAACG TGTGGAATTT
ATTATTATGA ATATTCCACT GAGCAGTGAT AATGCTGAAA TGTTGGTTGT GCAGTATTCG
AGTATTCATT TTGTGTTTAT TGATGTGCCA CCAGACAGCC AGGTCAACTC GGTATCAGGC
GCTAGCTATA ATGGTGCAAA AATAGCGGCT GAATTGATGC TATCGTTGTG CCGAAAACGC
CTATTATTCA TTAACGGTCC TCAGGGCTCC AGTGCATCGC GACTTCGCCT GCAGGGCTGG
TTAGATGTTT TAAAAGAGGA TGCGGACAGC AAAATTATTA ATCAGTTTGA AGGAGACTGG
CGAGCTAGCA GCGGTTATCG GTGCATGCGT CAAGCGCTCA GCGACGGTCA CGATTTCGAC
GGTGTGCTGG TGGCCAATGA CCAAATGGCG CTGGGTGTAC TAAGGGCATT AAGTGAATTT
AATTTAAGCG TACCCCAGCA AGTATCCGTT ATTGGTTTCG ATGATACTGT CGATAGCGCT
TATTTCACGC CACCATTGAC CACTATTAAG CAGGACTTTT TAACCATTGG CGAACGCGCT
GTTTTACTTG CCTTTAGCGT GGCGGATAAA GCAAAAAAAT CCTACCGGCA TGAGTCTATT
GTGACCGAGT TGATTGAGCG AAAAAGTACG CAAGCTTATC GACCCCCGCA GGCTAATGAG
CAAAAAATTA AGGTGCTGCT TAAGCAAATT GAAAAGTTAC TTATTGAATA A
 
Protein sequence
MNVTFKDVAE LANVSTQTVS RVTNGSLNVA PETREKVNAA IKQLGYIPNK GAQILGRAKS 
KMIGLVTLDI LLHGASLLAN GVRKQAKNLG YGTSLSVIAD PAIDKITTAV DDLKAQRVEF
IIMNIPLSSD NAEMLVVQYS SIHFVFIDVP PDSQVNSVSG ASYNGAKIAA ELMLSLCRKR
LLFINGPQGS SASRLRLQGW LDVLKEDADS KIINQFEGDW RASSGYRCMR QALSDGHDFD
GVLVANDQMA LGVLRALSEF NLSVPQQVSV IGFDDTVDSA YFTPPLTTIK QDFLTIGERA
VLLAFSVADK AKKSYRHESI VTELIERKST QAYRPPQANE QKIKVLLKQI EKLLIE