| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1983 |
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| Symbol | |
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| ID | 4627227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 2412914 |
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| End bp | 2414767 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639797148 |
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| Product | signal peptide peptidase SppA, 67K type |
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| Protein accession | YP_943350 |
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| Protein GI | 119945670 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.265279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTAA TCTATTCTTT TTTTAAGAGC ATTGCAAAAA CCATCAACAT CATGCGCTTA
TTTATTATCA ATGTTCTTTT TTTTGCCATC CTAGCAGCCA TTATTTTTGT TATTAACCTC
GATCGGCCCG CTCTGTTAGT GGCTGAGAAC TCAACCCTGC ATTTAAATTT CACAGGTAAT
ATAGTAGAGC AGGCAGCACC CGCTGATTTT GCAGGTGAAA TATCCAAAAA AATGATTTCA
TCCAATGAAA ATCAAAACAA CGAATATCAA ATTGATAAGA TTTTAAATAC CATCCATCGC
GCACAACAGG ATCCCAAAAT AAGTGCTATT TTATTAGAGC TTGACGGATT AGACGGTGCA
GCTATTAATC ATATTGCGGA TATCGGTAAA GCATTAAATG ACTTCAAATC AACGGGAAAA
TCCGTTACTG CCGTGGCCGA TAATTACTCT CAGACACAGT ATCTGTTAGC AAGTTACGCA
GATAAAATTT ACCTTAATCC GCAGGGTATG GTTTTACTGC CGGGTTACTC TGTTTATCGT
CTTTATTTTA AAGAGGCATT AGATAAATTA CTTATTACAC CACATATATT TAAGGTAGGT
ACTTACAAAT CCTTTGTTGA ACCTTTTACA ACAAATAAAA TGTCAGAAGC CAGCAAATTA
GCCAATAAAA ATTGGTTAGA TCAACTGTGG AAAAACTATA TTGATACCAT TCTTTTCCAG
CGTAAAGATA ACAGCAAGAT ATCGGTACAA TCAATATCTC CGACTTTAAA GCAATTAAAA
TCTTCCCTTA TCAAGGCTTC TGGCAATAGC GCAGTTTATG CATTACAAGT CGGGTTAGTC
GATGATCTTA AAAATCGTAA TGACGTGATC GACAAGTTAA AAAATCAGAC GCAAACATCC
GGTCATAAAC TTAATTTAGT CAGTTATGCG GATTATTTAC CGACACTGGC AGATATTTAT
GCCGTCAGCG GCGCAAAAGA TCAAATTGCT GTTGTTCATG CAAGTGGTGA AATTTTATCT
GGAACACAAC CTTCCAACGT GATTGGGGGT GACAGTTTTA GTCAATTATT AGAAACCGCA
CTCAATGATA ATCAAATTAA AGCTGTTGTT ATTCGTATTG ATAGCCCCGG GGGCAGTGCC
TTTGCATCGG AAAAAATTCG TCAGCACATT TTAGCCTTAA AAAAAGCAGA TAAAAAAGTC
GTTGTCTCAA TGGCGAGTGT GGCAGCATCT GGCGGTTACT GGATTGCATC AGCTGCCGAT
TATATTATCG CCACCCCGAC TACGTTAACA GGCTCAATAG GCATATTTGG CATGTATGCC
AGCGCCGATA AGGCATTAAA TAATTTTGGA ATATTCAATG ATGGTATTGG AACGACTGAA
CTTTCTAGTT TTAGCCCTAC ACGTGCTCTC AACCCTGAAC TTGCTGAAAT TATTCAATTA
GGGATAGAAA ACGGATATCA ACAATTTTTA GAGGTTGTTG CACAGGGTCG CAACATGACG
GTAGCAGAGG TAGATAAAAT AGCACAGGGT CGCGTATGGA CCGGTGTAGA TGCAAAATCA
CTTGGTTTGA TAGACGAATT AGGAAATTTA CAGGATGCTA TCAATACAGC CAGCAGGTTG
GCGAGTCTAC AGGATTACGG TGTTAAGATT ATTCAACCTG TACTGTCAAC CAAACAACAT
CTGATTAATG AATTATTGCT TGGTGCAGTT GAAATTATAC CCCAGAGTCT GCATATCAAT
GCGGCTTTAT ACCAGACACT GAATGCAATA GAATCTCAAA CGGCAATATT AACGCGGTTT
AATGATCCAC AGGGACGTTA CGCTTACTGC CCTATGTGTG TTGCAGCTAA ATAA
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| Protein sequence | MKLIYSFFKS IAKTINIMRL FIINVLFFAI LAAIIFVINL DRPALLVAEN STLHLNFTGN
IVEQAAPADF AGEISKKMIS SNENQNNEYQ IDKILNTIHR AQQDPKISAI LLELDGLDGA
AINHIADIGK ALNDFKSTGK SVTAVADNYS QTQYLLASYA DKIYLNPQGM VLLPGYSVYR
LYFKEALDKL LITPHIFKVG TYKSFVEPFT TNKMSEASKL ANKNWLDQLW KNYIDTILFQ
RKDNSKISVQ SISPTLKQLK SSLIKASGNS AVYALQVGLV DDLKNRNDVI DKLKNQTQTS
GHKLNLVSYA DYLPTLADIY AVSGAKDQIA VVHASGEILS GTQPSNVIGG DSFSQLLETA
LNDNQIKAVV IRIDSPGGSA FASEKIRQHI LALKKADKKV VVSMASVAAS GGYWIASAAD
YIIATPTTLT GSIGIFGMYA SADKALNNFG IFNDGIGTTE LSSFSPTRAL NPELAEIIQL
GIENGYQQFL EVVAQGRNMT VAEVDKIAQG RVWTGVDAKS LGLIDELGNL QDAINTASRL
ASLQDYGVKI IQPVLSTKQH LINELLLGAV EIIPQSLHIN AALYQTLNAI ESQTAILTRF
NDPQGRYAYC PMCVAAK
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