Gene Ping_1982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1982 
Symbol 
ID4627226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2412279 
End bp2412818 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content41% 
IMG OID639797147 
Product3-hydroxydecanoyl-(acyl carrier protein) dehydratase 
Protein accessionYP_943349 
Protein GI119945669 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID[TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAA TCCTATCCCA AAAAGAGTTG GGTAAAAACT CTTATACAAA AGAAGAATTA 
ATCAAATGTG GTCAAGGTGA GTTATTTGGA AAAGGAAATT GCCAACTGCC TGTAGATAAA
ATGCTGATGC TAGATCGGAT CATCTCCATT ACCGAGAACG GCGGCGAATT CGGTAAAGGT
GAATTGATTG CAGAATTAGA TATAGATGAA GCATTATGGT TTTTTGAATG CCATTTCCCG
GGTGACCCTG TTATGCCCGG TTGTTTAGGC CTTGATGCCA TGTGGCAATT AGTCGGCTTC
TTCCTTGGTT GGAGTGGCGG CCCCGGAAAA GGTCGTGCAC TCGGTGTAGG TAATGTAAAA
TTTACTGGGC AAATTTTGCC CACCTCCAAA AAAGTGACCT ACCGTATCAC CCTCAAACGT
TTAATTATGC GTAAACTTGT TATGGGTATT GCTGATGGTG TTGTTGAAGT GGATGGGAAA
GTTATTTATA CGGCAGAAGA TCTGAAAGTG GGTCTATTTG TTGATACAAC CAGTTTCTAA
 
Protein sequence
MTKILSQKEL GKNSYTKEEL IKCGQGELFG KGNCQLPVDK MLMLDRIISI TENGGEFGKG 
ELIAELDIDE ALWFFECHFP GDPVMPGCLG LDAMWQLVGF FLGWSGGPGK GRALGVGNVK
FTGQILPTSK KVTYRITLKR LIMRKLVMGI ADGVVEVDGK VIYTAEDLKV GLFVDTTSF