Gene Ping_1976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1976 
Symbol 
ID4627220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2404275 
End bp2405465 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content41% 
IMG OID639797141 
Productaromatic amino acid aminotransferase 
Protein accessionYP_943343 
Protein GI119945663 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1448] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0721225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAAC AAGTGAGTAT GGCGCCAGCA GATCCCATTT TAGGATTAAC TGATGCATTT 
AAAAAAGATC CACGCACTGA AAAAATCAAT TTGGGTGTTG GAATCTATAA AAATGAAAGT
GGGCAAACCC CCATTTTAGC GACTGTTAAA GAAGCCGAAA AACGCCTGTT AGCGACAGAA
ACAACAAAAA GTTATTTGAG CATTGAAGGT ATTGCCGCTT ACGGCGAAGC TGTTCAAAAA
TTGTTGTTTG GCCAGGATTC TGAGGTCATA CTATCAAATC GGGCACGTAC TGCACAGGCG
CCAGGTGGCA CCGGTGCACT GCGTACCGCA GCTGATTTTG CTGTCAAAAA ACTGGGCATA
AAAAGAATAT GGGTAAGTAA CCCAACCTGG GCAAATCATG GTAATGTTTT TAAAACCGCA
GGGCTTCAAG TGGTCAACTA TGACTATTAC AACGCGGAAC AAAATGATTT AGATTTTGCT
GCTATGTTGG AATCATTACA AGCGGTTGAA CCTGGTGATT TAGTGCTTTT CCATGGCTGC
TGCCATAATC CGACCGGTAT CGATCCAACC TTGGAGCAAT GGGAAATTTT AGCCAAATTG
ATTGCTGATT TAGGGGCTGT TCCATTTTTC GACTTCGCCT ATCAGGGATT TGCAACAGGT
GTGGAAGAAG ATGCTCAGGG ACTGCGTATC TTTGCTAAAT ACAATAAAGA ATTATTAGTT
GCTAACTCAT TTTCTAAAAA CTTTGGTTTG TATAATGAAC GTGTGGGTGG CATCACTTTA
GTGGCTGAAG ATAGCGAGAT TGCAGATTCT GCATTTAGTC AAATTAAATC AGGTATACGT
TCAAATTACT CCAATCCTCC AGCTCATGGT GCTGCTATTG TGACTACTAT TCTGAGCGAT
CCTGATCTTT ATCAACAATG GGATAAAGAA GTTGCAGATA TGCGCGATCG TATAAAAGAG
ATGCGTGAAT TATTTGTAAA CACATTGAAA GAAAAGGGTG TCACCAAAGA TTACAGCTTT
ATTAGCCGTC AAAATGGTAT GTTTTCTTTC TCCGGTTTGT CTGCTGAACA GGTCAATCGC
TTAAAAGAAG AGTTTGCTAT CTACATTGTA GGTTCAGGTC GTATTTCGGT CGCCGGTATG
ACCAAAGATA ATATGCAACC TTTATGTGAT GCACTGGTTA AAGTAATCTA A
 
Protein sequence
MFEQVSMAPA DPILGLTDAF KKDPRTEKIN LGVGIYKNES GQTPILATVK EAEKRLLATE 
TTKSYLSIEG IAAYGEAVQK LLFGQDSEVI LSNRARTAQA PGGTGALRTA ADFAVKKLGI
KRIWVSNPTW ANHGNVFKTA GLQVVNYDYY NAEQNDLDFA AMLESLQAVE PGDLVLFHGC
CHNPTGIDPT LEQWEILAKL IADLGAVPFF DFAYQGFATG VEEDAQGLRI FAKYNKELLV
ANSFSKNFGL YNERVGGITL VAEDSEIADS AFSQIKSGIR SNYSNPPAHG AAIVTTILSD
PDLYQQWDKE VADMRDRIKE MRELFVNTLK EKGVTKDYSF ISRQNGMFSF SGLSAEQVNR
LKEEFAIYIV GSGRISVAGM TKDNMQPLCD ALVKVI