Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1976 |
Symbol | |
ID | 4627220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 2404275 |
End bp | 2405465 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639797141 |
Product | aromatic amino acid aminotransferase |
Protein accession | YP_943343 |
Protein GI | 119945663 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0721225 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGAAC AAGTGAGTAT GGCGCCAGCA GATCCCATTT TAGGATTAAC TGATGCATTT AAAAAAGATC CACGCACTGA AAAAATCAAT TTGGGTGTTG GAATCTATAA AAATGAAAGT GGGCAAACCC CCATTTTAGC GACTGTTAAA GAAGCCGAAA AACGCCTGTT AGCGACAGAA ACAACAAAAA GTTATTTGAG CATTGAAGGT ATTGCCGCTT ACGGCGAAGC TGTTCAAAAA TTGTTGTTTG GCCAGGATTC TGAGGTCATA CTATCAAATC GGGCACGTAC TGCACAGGCG CCAGGTGGCA CCGGTGCACT GCGTACCGCA GCTGATTTTG CTGTCAAAAA ACTGGGCATA AAAAGAATAT GGGTAAGTAA CCCAACCTGG GCAAATCATG GTAATGTTTT TAAAACCGCA GGGCTTCAAG TGGTCAACTA TGACTATTAC AACGCGGAAC AAAATGATTT AGATTTTGCT GCTATGTTGG AATCATTACA AGCGGTTGAA CCTGGTGATT TAGTGCTTTT CCATGGCTGC TGCCATAATC CGACCGGTAT CGATCCAACC TTGGAGCAAT GGGAAATTTT AGCCAAATTG ATTGCTGATT TAGGGGCTGT TCCATTTTTC GACTTCGCCT ATCAGGGATT TGCAACAGGT GTGGAAGAAG ATGCTCAGGG ACTGCGTATC TTTGCTAAAT ACAATAAAGA ATTATTAGTT GCTAACTCAT TTTCTAAAAA CTTTGGTTTG TATAATGAAC GTGTGGGTGG CATCACTTTA GTGGCTGAAG ATAGCGAGAT TGCAGATTCT GCATTTAGTC AAATTAAATC AGGTATACGT TCAAATTACT CCAATCCTCC AGCTCATGGT GCTGCTATTG TGACTACTAT TCTGAGCGAT CCTGATCTTT ATCAACAATG GGATAAAGAA GTTGCAGATA TGCGCGATCG TATAAAAGAG ATGCGTGAAT TATTTGTAAA CACATTGAAA GAAAAGGGTG TCACCAAAGA TTACAGCTTT ATTAGCCGTC AAAATGGTAT GTTTTCTTTC TCCGGTTTGT CTGCTGAACA GGTCAATCGC TTAAAAGAAG AGTTTGCTAT CTACATTGTA GGTTCAGGTC GTATTTCGGT CGCCGGTATG ACCAAAGATA ATATGCAACC TTTATGTGAT GCACTGGTTA AAGTAATCTA A
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Protein sequence | MFEQVSMAPA DPILGLTDAF KKDPRTEKIN LGVGIYKNES GQTPILATVK EAEKRLLATE TTKSYLSIEG IAAYGEAVQK LLFGQDSEVI LSNRARTAQA PGGTGALRTA ADFAVKKLGI KRIWVSNPTW ANHGNVFKTA GLQVVNYDYY NAEQNDLDFA AMLESLQAVE PGDLVLFHGC CHNPTGIDPT LEQWEILAKL IADLGAVPFF DFAYQGFATG VEEDAQGLRI FAKYNKELLV ANSFSKNFGL YNERVGGITL VAEDSEIADS AFSQIKSGIR SNYSNPPAHG AAIVTTILSD PDLYQQWDKE VADMRDRIKE MRELFVNTLK EKGVTKDYSF ISRQNGMFSF SGLSAEQVNR LKEEFAIYIV GSGRISVAGM TKDNMQPLCD ALVKVI
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