Gene Ping_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1960 
Symbol 
ID4627001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2383691 
End bp2384998 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content39% 
IMG OID639797126 
Producthypothetical protein 
Protein accessionYP_943328 
Protein GI119945648 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000119339 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.362131 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAAAA AATCTCTTCT TGCTGTTGCA CTTGCTTCCA TTCTAACCGG TTGTGGAGGT 
TCATCTGATG GTACAGATTC AGGGTCAACT GACACAGGAT CAACCACTTA TACCGTTATT
GATGGTTATT TAAGTGCTGC TGAAGTTTAT GTTCTTTCAC CCGATGGTGG CACTGAAATA
CTTATTGGTG AGACCGATGC CAATGGCAAA ATACAAATAG AAGCTAAATA TAAAGGTTAT
ACTGTGATAG CGAAGATTAT TGCAGGTAAA ACGACTGACA GTGATAGCGC AGGATTTGTT
GCAAAAAGTT ATGAAATGCG CAGTACAGTG GATTCTACCG TGGTGACTCC TTTTACAACC
CTTGCTAATA TTAGTGTGAT GACATTAACA GCGCTTGCCG CTGAGCTGCA ACTCGACGAA
GCAGACGTAA GCGGTGATTA TGTCAAGTCA ACGGACGGTA AAGCACATCT AGTGGCACGT
GGCCTGGCCA AAAAATTAGA TGATGACAAT GATGATGATG ATGCGCCTGG TTTAAGAGCC
TATGCAGGCG AATCGGTTTC TTATATTGAT ACTAATTTCA CTGAGAATGA TGATCTGAAA
GAAGTTGAAC TGAATGATGA TAACTCGAGC CATCACGCTC GTATTGCCAA CATTGTCGAT
TTTATCGAAG ATGGTAAAAC ATTCTATGGC ACCAGTTTTA GTCAATATTA TTCTTCGATA
GAAGGTATTA TGGAAATATC ACTTGTTGAC GGTAAAGGAA CATCAACATA TAACGATACA
AATAAAACCG ATGATACTTT TAACTACACT ATTGACAATA ATAAAGTAAT GATTGACGGT
GTTAGTGATG AGTATATCTA TGTTTCTAAA GAATTAGTAC TGTCGGTGAC AGCTGACAAT
GATCTTTTTG TTTACTCTAA GGCAGATTTA AACAGCACAA CTGGCTTTAC TGCAGATGAG
ATACAAGGTA AAACTTGGTA CGTCATGAAT GATACTAACA CTGCAGGGAC ACAAGCAATT
GAGATCTTCA CTGCAAGCCT TACTCTCCAT GCAACAAATC AGACATTAAC AGCTGCTTAT
GATGAAGAGG TGCAAAATGG TACTTATACA TTAATAAACG GTACCCTTGC ACTTACAATA
GAAAATGATG CAGGGCCATC TGATTACCTG GAGTTTAGAA AAGGTGCTGG TAATGAAGAC
ATGATTATTG CTATGGAAGT GAATTCTGCA ACGACGCCTA TCATATTTTC TACTGAAAAA
AATTTCGTAT CGACTCTCGC TGGTAAATGG GCAATGTTAT CTAAATAA
 
Protein sequence
MLKKSLLAVA LASILTGCGG SSDGTDSGST DTGSTTYTVI DGYLSAAEVY VLSPDGGTEI 
LIGETDANGK IQIEAKYKGY TVIAKIIAGK TTDSDSAGFV AKSYEMRSTV DSTVVTPFTT
LANISVMTLT ALAAELQLDE ADVSGDYVKS TDGKAHLVAR GLAKKLDDDN DDDDAPGLRA
YAGESVSYID TNFTENDDLK EVELNDDNSS HHARIANIVD FIEDGKTFYG TSFSQYYSSI
EGIMEISLVD GKGTSTYNDT NKTDDTFNYT IDNNKVMIDG VSDEYIYVSK ELVLSVTADN
DLFVYSKADL NSTTGFTADE IQGKTWYVMN DTNTAGTQAI EIFTASLTLH ATNQTLTAAY
DEEVQNGTYT LINGTLALTI ENDAGPSDYL EFRKGAGNED MIIAMEVNSA TTPIIFSTEK
NFVSTLAGKW AMLSK