Gene Ping_1859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1859 
Symbol 
ID4625242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2258974 
End bp2259825 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content39% 
IMG OID639797033 
Productthioredoxin domain-containing protein 
Protein accessionYP_943235 
Protein GI119945555 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.145875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.127398 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATACTA ATAATCATGA TATTACCGTC TCTACTTTCC CATCAATTAT TATCGAAGGT 
TCAAAAGTAA ACCCCGTGTT AGTGGTTTTC TGGTCCCCGC AAAGCGAACC TTGTAATACT
TTATTACCTT TACTGGATAA ATTACATGCC GAAGATGAAC AGGCATTTAC ACTAGCGCGC
ATAAATTGCG ATCAAGAACA GCAGATAGTC AACCACTTTG GCGTGCAAAG TGTCCCCAGT
GTCTTTATGT TCATCGATGG GCAAGGGGTA GATGGCTTTG CCGGAGAGCA AAGTGAAGAA
TTTATACGTA CTTTTATAAA TAAGCATACT CCCGACCAAA GTCAGGTTTT ACTGCAGGCG
GGGCAAACAT TATTCGCACA AGGGAAATTA GTAGAAGCAA AAGAAAAGAT CATTGAAGCC
ACTAGAATGG CGCCTGATAA TAATGATATC AAATTAGCAT TAGCGCAGAT TTACCTTGCA
ATGGACCAAC ATGAAGATGC CAGACCTATT TTGAAGATTA TTCCTATGGC CCATCAAAAC
ATGATCTACC ATAGTTTAAT ATCGCAATTA GAATTAGCGC AGCAATCAGC ACAAACGCCT
GAAATAACTG CGTTAGAAAA ACAACTTGAA ACTGCACAGG ATAAAATGGC CATTGAATAT
CAACTGGCCA TTCAATACAA CCATGCTAAC CGTAATGGAG AAGCATTAGC TTTATTATAC
AAACTATTAG TGAACAACTT AGACTACGAT AACGGGTCGC CCAAAAAAGC CATGATAGAC
ATTCTCGCCA CCATAGATGA TGCTGCTTTA GTCAGTGAAT ACCGTCGTAA ATTGTATAGT
TTGCTGCATT AA
 
Protein sequence
MHTNNHDITV STFPSIIIEG SKVNPVLVVF WSPQSEPCNT LLPLLDKLHA EDEQAFTLAR 
INCDQEQQIV NHFGVQSVPS VFMFIDGQGV DGFAGEQSEE FIRTFINKHT PDQSQVLLQA
GQTLFAQGKL VEAKEKIIEA TRMAPDNNDI KLALAQIYLA MDQHEDARPI LKIIPMAHQN
MIYHSLISQL ELAQQSAQTP EITALEKQLE TAQDKMAIEY QLAIQYNHAN RNGEALALLY
KLLVNNLDYD NGSPKKAMID ILATIDDAAL VSEYRRKLYS LLH