| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1835 |
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| Symbol | |
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| ID | 4626130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 2225555 |
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| End bp | 2227519 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639797009 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_943211 |
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| Protein GI | 119945531 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0773497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.315507 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCGTA GTGTTAAAAC CGAATTTTTT AAGTTTATCC ACAGTACGTT ACCCTCTTGG
CTTATATTTT CATTAAGTCT CTGTATTACC TTTATTGCTT GGTCGATCAC GACCAAATCT
AATCAACTCC ATATCCAAGA GCTATTTAAA TTTGAGGTGG CCCAAACTAT TCGCTCCATC
GAACAGCGTA TGCAGGAATA TGAGCAAGTA TTACGTGGCG GTGTAGGGTT ATTTAAATCA
AGTGATCACG TTAATCGCCT CGAATTTCAT CATTATATAA GTAATTTACA CGTTGAAAAA
TATTTGACTG GTATTCAAGG TATTGGCTAT GCCGTCATGT TGAAACCAGA AGAAAAAGAC
ACATTTGTTA ATATGGTACG ACTAGAAGGT TTCAATGATT TCAGTGTCTT TCCAGAAGGA
TCTCGTGATA AATACAGTAG CATTCTCTAT CTTGAGCCCT TCACGGCCAG AAATCAGCGA
GCGTTTGGAT ATGATATGTA CTCAGAGGAG GCTCGCCATA CCGCCATGGA CATTGCCCGC
GACAATGGTG ATATCGCATA TTCAGCTAAA GTTAAACTGG TTCAGGAAAA TGGCGATGAT
TTACAGAATG GATTTCTCAT CTATCTCCCT TTATATCGCA ATGGTGCTCC TATTGAAAAT
ATTTCTCAGC GTCAAAAAGA ACTTATCGGA TATGTATATA GCCCATTTCG TATTGATAAT
CTGATTAATG GCATTCTCTT AGGTGATGAA ATTCGTCGCA TAAACTTTTC AATATATGAT
GGACATTCAG AAAATGCAAA TAATCTACTT TACGCTCCCG ATAGAATTGG GGCCTATTTG
CCTAGTGCTT ATAAAAAAGA ATCTAAACCT GCTTTTTACG TTGTTAAGAC GATTGAATTT
CCAGGCCGAA ATTGGACCAT TCCCTTTTAT AGTACCTCTG TTTTTGAAAA GAGTGTTGAA
AATAACCTAG CTAAATTAGT TGGCATATCA GGCATATTTG TATCGGTACT TTTGCTAATT
GTAATGCTGA ACATTACAAT CACCGGGAAA AAATCTATGC AGGCGAAAGC GGAATTAGAA
ATATTAATTG ATCGACTAAA AGCAGCCGCT TCAGCGGGAA TTGTAGGGAT TTGGGATTGG
GATGTTGAAA AAAACATTCT GACTTGGGAC TCCGTCATGT ATAAATTATA TGGTTTACAA
AAGTCAGATT TTGAAGATTT GTATGAAGCG TGGATTTCTA GAGTACACAT AGATGACCGG
ATGCATATTG ACGGTGAAAT ACAGGCGGCC CTTAGACATG AACGAGAATA TTGTCCTGAG
TTTCGAGTTC TGTGGCCAGA TAGCTCAGTT CATTATATTA AAGCGGTATC AAAAACGACA
TTTGACGAAA TAGGCAAGCC AATCCGAATG GTTGGCGTCA ATTATGATAT TACTGAACAA
AAAAAAATTC AAATGCGCCT TGATAAAGAG GCCTCATATG ATCATTTAAC GCACCTTCCT
AATCGTCGTT TGCTCAATGA TAGATTAAAG CAAGCGATAG CCTTTTCTAA ACGCACTCAA
AAAAATCTGG CTATTCTTTT TATTGATTTA GATGGATTTA AAAGCATAAA TGATAGCCAT
GGACATCAAG TCGGTGATTG GTTATTAACA GAAGTATCCA AACGTATTCA ATATTGTTTG
CGCGCTACAG ACACAGTTGG ACGACTAGGA GGGGATGAGT TTGTAGTTGT ACTCCCTGAA
ATTTATGAGA ATGCCAAGGA GGTAGCTAAT AAAATACTAA ATAGTTTAGA AGAGCCTTTT
GTAATAACAA ATAATGGTGT CCTTCATATT TCTTCAAGTA TTGGAGTGGC AATTTATCCT
CTGGATGCAA AAAGCCAAAC TATGTTAATG GAGTGCGCTG ATAAGGCGAT GTATGAGGCA
AAAAAAAGAG GCCGTAATAA AGTTGTTTTT TTTGATGTTG CTTAA
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| Protein sequence | MKRSVKTEFF KFIHSTLPSW LIFSLSLCIT FIAWSITTKS NQLHIQELFK FEVAQTIRSI
EQRMQEYEQV LRGGVGLFKS SDHVNRLEFH HYISNLHVEK YLTGIQGIGY AVMLKPEEKD
TFVNMVRLEG FNDFSVFPEG SRDKYSSILY LEPFTARNQR AFGYDMYSEE ARHTAMDIAR
DNGDIAYSAK VKLVQENGDD LQNGFLIYLP LYRNGAPIEN ISQRQKELIG YVYSPFRIDN
LINGILLGDE IRRINFSIYD GHSENANNLL YAPDRIGAYL PSAYKKESKP AFYVVKTIEF
PGRNWTIPFY STSVFEKSVE NNLAKLVGIS GIFVSVLLLI VMLNITITGK KSMQAKAELE
ILIDRLKAAA SAGIVGIWDW DVEKNILTWD SVMYKLYGLQ KSDFEDLYEA WISRVHIDDR
MHIDGEIQAA LRHEREYCPE FRVLWPDSSV HYIKAVSKTT FDEIGKPIRM VGVNYDITEQ
KKIQMRLDKE ASYDHLTHLP NRRLLNDRLK QAIAFSKRTQ KNLAILFIDL DGFKSINDSH
GHQVGDWLLT EVSKRIQYCL RATDTVGRLG GDEFVVVLPE IYENAKEVAN KILNSLEEPF
VITNNGVLHI SSSIGVAIYP LDAKSQTMLM ECADKAMYEA KKRGRNKVVF FDVA
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