Gene Ping_1808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1808 
Symbol 
ID4626161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2194062 
End bp2194637 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content43% 
IMG OID639796982 
ProductCMP/dCMP deaminase, zinc-binding 
Protein accessionYP_943184 
Protein GI119945504 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.607751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0647304 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTTGC AACCATCTGA AATTAGTTTT AAGTTACCTG GCTGGATAGA CCTTTTTTCT 
CAACGCTATG TTTCAAGTAC CGATCTAAAT ATACGCATGG CTTTTGTTAT TTCAGCCGCG
AAAAAGAATG TTGAGCAAGG GAGCGGGGGA CCTTTTGCTG CAGCTGTCTT TGAGATCGAA
ACAGGCAAAC TGGTTTCCCT TGGTGTTAAC TTAGTGACAA CACAGGGTTT GTCTATTCTG
CATGCGGAAA TAGTCGCGCT AGTCGCTGCT CAAAGGAAGC TTCGCACCTA TGATCTCGCC
ATTACCCGGC ATGAATTAGT CACCAGCGCG GAGCCCTGTG CAATGTGCCT AGGCGCTATT
TCATGGTCAG GAGTGTGCCA TGTTGCAACA GCCGCGACAG ATCAAGACGT AAGCGCTATT
GGCTTTGATG AAGGCCCGAA ACCAAACAAT TGGATTAAAT CCTTAAAGGC CAGAGGAATA
AAGGTGAGTA CAAATATTCA ACGAGAATTT TCCTGCTCAG TTTTACAGTT ATATATTATA
AATAATGGCT GTATTTATAA TTCAGGGAAA AGTTAA
 
Protein sequence
MFLQPSEISF KLPGWIDLFS QRYVSSTDLN IRMAFVISAA KKNVEQGSGG PFAAAVFEIE 
TGKLVSLGVN LVTTQGLSIL HAEIVALVAA QRKLRTYDLA ITRHELVTSA EPCAMCLGAI
SWSGVCHVAT AATDQDVSAI GFDEGPKPNN WIKSLKARGI KVSTNIQREF SCSVLQLYII
NNGCIYNSGK S