Gene Ping_1804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1804 
Symbol 
ID4626157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2189729 
End bp2190619 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content36% 
IMG OID639796978 
Producthypothetical protein 
Protein accessionYP_943180 
Protein GI119945500 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.363545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.129857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCCA GTTTATGTTT AATTATTGCT ACATTTTTGT GGGGAAGTTC ATTTGTGGCA 
TTAAAATATG CCATTGAATT TTATGATCCG ACTTTTGTTA TTTTTTTAAG AATGTTAATT
ACATTAATTA CTTGTACTTT TTTTTGGCGT TGGATAAAAC GTTTCAGCTA TCGAAAGGGA
GACTGGAAAT TTTTGATCTC TATGTCACTG GCGGAGCCCT GTTTATATTT TTTATTTGAG
GGTATTGCGC TGCAAAATAC CTCTGCATCA CAAGCGGGGG TATTAGTCTC ATGTTTACCT
ATTTTAATTG CGATACTTGC ATTTTATATT TTAAGAGAAC AATTATCTAA AGCGATTCTG
GCAGGTTTTA CCTTGTGCAT TTCGGGTAGT ATTTTATTAA CTATTATGTC CCCCAGCTCA
GCACATGCAA GTAATCCATT ACTGGGTAAT TTTGTAGAGT TTTTAGCCAT GATCTGTGCT
GCCTATTATT CCGTCAGTAT TAAATATCTT TCAGGGCGTT ATTCACCTTT TGCGTTGATT
GCACTACAGG GATTAAGTGG GACACTGTTT TTTGCACCCT TTTTGCTGTT TAATGATCTG
CCTGTTACAC ATAATAGTAA TGCACTCCTT AATATTCTTT ACTTGGGGAC AGTGGTCACC
TTTGGGGCCT ATGGTTTATA CAATTATGCA TTGACAAGAG TGTCAGTATT AACGGCGGCT
TCTTTTTCTA ACTTAATACC CATATTTTCG CTAATGTTAT CTGCAATAAT ATTGGGTGAG
AGATTAAATA GTGCTCAATG GCTGAGTATC GCTATTGTAT TCTTAGGCAT TATCATTAGT
CAGAAACATA AATCCGTTAC GCCGGCGAGT GCTGAAATCC AAAGTATATA A
 
Protein sequence
MPASLCLIIA TFLWGSSFVA LKYAIEFYDP TFVIFLRMLI TLITCTFFWR WIKRFSYRKG 
DWKFLISMSL AEPCLYFLFE GIALQNTSAS QAGVLVSCLP ILIAILAFYI LREQLSKAIL
AGFTLCISGS ILLTIMSPSS AHASNPLLGN FVEFLAMICA AYYSVSIKYL SGRYSPFALI
ALQGLSGTLF FAPFLLFNDL PVTHNSNALL NILYLGTVVT FGAYGLYNYA LTRVSVLTAA
SFSNLIPIFS LMLSAIILGE RLNSAQWLSI AIVFLGIIIS QKHKSVTPAS AEIQSI