Gene Ping_1773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1773 
Symbol 
ID4626106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2155557 
End bp2155940 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content41% 
IMG OID639796953 
Productrare lipoprotein A 
Protein accessionYP_943155 
Protein GI119945475 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.662489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACGT TGAGTATTAA ACGATTAACT ATTGCTGTTT TTGCCATCAC TCTTTTCGCT 
TGTATGCCGG TACTCTCTCG AAGCCGCGAC GGGTATAAAG AAGTTGGGAA AGCTTCTTTT
TATGCCAATA AGTTTCAAGG CAGACTGACC GCTAGCGGTG CTGTTTTTGA TCAAAATGCG
AAAACAGCAG CGCACAAAAA ATTATCTTTT GGGTCAAAAG TGAAAGTAAC TAATTTAACA
AATGGCAAAA GTATTATGGT GATCATCAAT GACAGAGGCC CTTTTGTAAA AGGGCGTATT
ATTGACCTGT TACGCTCCGC ATTCAGTCTT ATTGGTTCTC TCGACTCAGG CGTGATTAAA
GTGCGAATTG AAGTGGTTCG CTAG
 
Protein sequence
MMTLSIKRLT IAVFAITLFA CMPVLSRSRD GYKEVGKASF YANKFQGRLT ASGAVFDQNA 
KTAAHKKLSF GSKVKVTNLT NGKSIMVIIN DRGPFVKGRI IDLLRSAFSL IGSLDSGVIK
VRIEVVR