Gene Ping_1744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1744 
Symbol 
ID4626709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2122690 
End bp2124405 
Gene Length1716 bp 
Protein Length571 aa 
Translation table11 
GC content41% 
IMG OID639796925 
Productmalate dehydrogenase 
Protein accessionYP_943127 
Protein GI119945447 
COG category[C] Energy production and conversion 
COG ID[COG0281] Malic enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.945317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAAAG GTAAATATTT AAAATGGGAA GATTCTGAGG GTAACGTTTT TAGACCTGTT 
TCCCTTACTG GAAACGAATT ACTCAACAAT AGGACGCTCA ATAAGAGTAC GGCATTTACT
TATCAAGAGC GTGAAGATTT TGATCTTAAT GGTCTTTTAC CACCACGCGT ACAAACCTTT
GAAGATCAAC TGAAACGGGT TTACCAGGGA TTTAGCGCTT CCTCTACGGA TATTGAAAAA
TACCAATATT TACGTGCCTT GCAGGATAGG AATGAAACAT TATTTTATGC CCTTATCTCA
CGTAATATTG AAGAGATGAC GCCTATTATC TATACCCCGA CGGTAGGTAA AGCCTGTCAA
GAATTTAGCC ATAGGTTTCA AATAGCCAGA GGACTTTATT TAACAACGGA TAATATTCAT
GATGTCGGCA GCATGGCACG AGAATTTACA GGTAAAGATA TCCAAATTAT CGTTGTAACA
GATAGCCAGG GCATTCTTGG CATTGGCGAT CAAGGTGTTG GAGGAATGGG CATACCAATT
GGTAAATTAT CACTTTATAC CTTAGGTGCC GGTATTCACC CGGATCATTG CATGCCAATC
GCATTAGACA TAGGGACAGA TAATCAGGAT TTACTTGCTG ATCCTATGTA TTTAGGGATT
CCCAAAAAAC GTTTAACAGG TGAACCTTAT AAAGCGTTTA TTAAAACCTT TGTTGAACAG
GTGAAATTAC ATTTTCCAAA AGCCGTTTTG CAATGGGAAG ATTTCAGTAA ATCTAACGCC
TTTGATAATT TATCTGATTA CGAAGATGAG TTGCCATCAT TTAATGATGA CGTACAAGGC
ACGGGTGCTG TTGTATTAGC CGGGATAATT GGCTCCACAA AAATGAAAGG TGAAACATTA
ATAGATCAGA CTTATGCTGT TTACGGCGCA GGAGCAGGTG GTGTTGGTGT TGCCGATCAA
ATTTTTGCGG GTTTACTTAA AGAAGGTCTG TCCCACCAAG AGGCGCGCGA TAGAATATTT
ATCCTTGATT CCCGCGGTGT GGTGTTTGCA GATAGAGAAG GTTTAGATGA ATACAAAAAA
CGTTTTGCTA AACCTGTTGA GTTAGCAAAA GATTGGCAAC TGGCAGATAG CAATAAGGTC
AATCTTACTG AGTTACTCGA TAATGTTCCC GTTACCGTTT TATTAGGCTG CAGTGGTGTA
GGTGGTGCAT TTAAAGAGCA TCATATTAAG AAAATGTTAG ATCATACAGC ACGACCTATG
ATCTTCCCGC TTTCTAACCC AACCAGTTGT TGTGAAGCGG TGCCGGAAGA TATTTATAAG
TGGTCCGATG GCCAAGCTAT TGTTGCAACG GGCAGTCCTT TTGCTGATCT GCATTTTAAG
GACAATATCT ATCGCATCGG ACAGGGAAAT AACATCTTTA TTTTCCCCGG TGTCGGGCTC
GCAGCGATCA CTGCTGAAGT GAAAAAAATC ACCAAGGATA TGTTTACTAC TGCCTCTTTT
GCATTAGCCG ATTATGTGTC ACAAGAAGAT CTTGATGCAG GTTGCGTATT TCCAAAAATT
AGTGAGCTGA GAGATGTTTC TCTCCATGTT GCTAAGGCAA TACTTGAGCA AATTCAGCAA
ACGGATCCTG AGTGTCATCT GCGTGATAAA GATATCACTA AAGAGCTTGC ATTACGGATG
TGGGAACCGG CGTACTTGCC CTACCGCAGA GCTTAA
 
Protein sequence
MGKGKYLKWE DSEGNVFRPV SLTGNELLNN RTLNKSTAFT YQEREDFDLN GLLPPRVQTF 
EDQLKRVYQG FSASSTDIEK YQYLRALQDR NETLFYALIS RNIEEMTPII YTPTVGKACQ
EFSHRFQIAR GLYLTTDNIH DVGSMAREFT GKDIQIIVVT DSQGILGIGD QGVGGMGIPI
GKLSLYTLGA GIHPDHCMPI ALDIGTDNQD LLADPMYLGI PKKRLTGEPY KAFIKTFVEQ
VKLHFPKAVL QWEDFSKSNA FDNLSDYEDE LPSFNDDVQG TGAVVLAGII GSTKMKGETL
IDQTYAVYGA GAGGVGVADQ IFAGLLKEGL SHQEARDRIF ILDSRGVVFA DREGLDEYKK
RFAKPVELAK DWQLADSNKV NLTELLDNVP VTVLLGCSGV GGAFKEHHIK KMLDHTARPM
IFPLSNPTSC CEAVPEDIYK WSDGQAIVAT GSPFADLHFK DNIYRIGQGN NIFIFPGVGL
AAITAEVKKI TKDMFTTASF ALADYVSQED LDAGCVFPKI SELRDVSLHV AKAILEQIQQ
TDPECHLRDK DITKELALRM WEPAYLPYRR A