Gene Ping_1679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1679 
Symbol 
ID4627167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2037531 
End bp2038427 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content42% 
IMG OID639796868 
Producthypothetical protein 
Protein accessionYP_943070 
Protein GI119945390 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGTA AAATAAATTA CACTATTGTC GGACTCTTTG TGGTTATCCT AATGACAGCC 
TTGTTAAGTA TAACCTTCTG GTTAACAAGG CAACACGGAC AACAAAGCTA TGATACTTAC
TTTGTGCATT TATTAGAATC CGTTGCAGGT TTGAACACCG ACGCCACGGT TAAATATCGA
GGCGTAGACG TGGGCTCAGT GGTCAGAATT GGACTTAAAG TCGATAACCC TGAAGTAGTG
GAACTACTGA TCAAAATAAA CCAGAACACA GCTATCAAAA CAGATACCAC TGCGGCGCTA
AATTTTTACG GTATTACCGG GCTTGCCTAT ATCGAGCTGG AGGGTATCGA CAAAGAAGCC
GCGTTGTTAA AGAGTGTCAA TGGTGAAATA CCCGTCATCC CGTCAAGACC CTCAACATTA
AGAAGAATTG ATCAGTCTTT GAGCAAATTA GCAGAAAAAT CGATTGAAAC ACTGGAAAAC
ATCAACCGCT TACTTAATGA TAAAAATATA AATAATGTTG AACTGCTGCT CTTTGAAAGC
AAAGAACTGC TTAAAGATTT GCGGGTACAA TTAAAAGGTA TTCGAACGCT GGTTGATAAT
GGCGTCGTAA TGGAGAACAA GATAGCCGCA ACCTCTGAAA AAATCAGTGC AGCCTCAATA
AGTGTCCAAC GAATGGCTGA TAATCTTGAA AAAAACACCA CTGGCCTTAG TCAGGAGATG
AGCCGGGGAA TGCACGCGAA TTTTAGTGCA TTGAACCTGC TTTTAAGCGA TCTTGATATT
CTTACCGGCA CTCTGCAGAC AACCCTGCAG GACATTAAAG ACAGCCCTGC AGATTTGCTT
TTCAAACGCA CGCAGGCAAA TCCTGGACCT GGTGAGGACG GCTATTATGA AAAATAG
 
Protein sequence
MESKINYTIV GLFVVILMTA LLSITFWLTR QHGQQSYDTY FVHLLESVAG LNTDATVKYR 
GVDVGSVVRI GLKVDNPEVV ELLIKINQNT AIKTDTTAAL NFYGITGLAY IELEGIDKEA
ALLKSVNGEI PVIPSRPSTL RRIDQSLSKL AEKSIETLEN INRLLNDKNI NNVELLLFES
KELLKDLRVQ LKGIRTLVDN GVVMENKIAA TSEKISAASI SVQRMADNLE KNTTGLSQEM
SRGMHANFSA LNLLLSDLDI LTGTLQTTLQ DIKDSPADLL FKRTQANPGP GEDGYYEK