Gene Ping_1626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1626 
Symbol 
ID4623613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1981260 
End bp1982672 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content43% 
IMG OID639796812 
Productglutamyl-tRNA synthetase 
Protein accessionYP_943021 
Protein GI119945341 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00464] glutamyl-tRNA synthetase, bacterial family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0744892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.201462 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTA AAACACGTTT TGCCCCTAGC CCCACTGGTT TTTTACATGT TGGTGGCGCG 
CGTACTGCGC TCTATTCCTG GTTACATGCG AAAAGTAAAG GGGGTGAGTT TGTACTGCGC
ATAGAGGATA CGGATATTGC GCGTTCAACT CAAGAAGCAG TTGATGCGAT CTTAGAAGGG
ATGACTTGGA TGGGTTTGAC TTGGGATGAA GGTCCTTATT ACCAGACCAA ACGTTTTGAT
CGCTATAAAG AAATCATAGC AAAAATGCTT TCCGATGGAA CAGCTTACAA ATGTTACTGC
ACAAAAGAAC GCGTTAATGA ACTGCGTGAA GCGCAGGAAA AGGCAGGCGA GTCACCACGC
TATGATAGCA AGTGTCGAGG CTTAGCACCG CAGAACACAG ATGCCCCTTA TGTTATACGT
TTCAAAAATC CTAAAGAAGG CAGTGTTAAA TTTGACGATC ATGTACGTGG TCCTATTGAA
TTTTCAAATA CCGAGCTTGA CGATTTAATT ATTCAGCGTA CCGATGGCAC ACCGACTTAT
AATTTTTGTG TGGTCGTTGA TGATTGGGAC ATGGGTATTA CTTATGTTGT TCGAGGCGAA
GATCATATCA ACAATACACC GCGGCAAATT AATATATTAA AAGCATTAGG AGCCCCTCTC
CCTGAATATG CGCATGTTGC TATGATTTTA GGGGATGACG GCGCAAAACT GTCTAAACGT
CATGGTGCAG TCTCTGTCAT GCAATTCCGT GATGAAGGTT ATTTACCTGA AGCACTTAAA
AACTATCTGG TACGTTTAGG TTGGTCACAC GGTGATCAGG AAATTTTCTC AGAAAAAGAG
ATGATTGAGC TATTTTCCTT AGATGCGATT AATAAAGCTC CTTCTGCATT TAATACTGAA
AAATTACTTT GGTTAAATCA ACATTATATT AAATCACTGG ATCCGGCTTA CATTGCACAG
CATCTTGCAT GGCACATGAC GAATCAAAAA ATAGATATGA CTAATGGTCC AGCCCTTCCT
GAAATTGTCA GCGCACTTTC TGAACGCGCT AAAACATTAG TTGAGTTAGC GACCACCAGC
CGCTACTTCT TTGAAGAGTA TGAAGACTTT GATGCTACAG CTGCCAAGAA ACATCTTCGC
CCAGTGGCTG AAGATGCACT TGTTTTAGTT AAGCAAAAAC TGCAAACAAG CGATGACTGG
ACAGATCCAG CACTGCATCA AATAATCAAT GATACTGCCA ATGAATTAGG GGTTGGTATG
GGTAAAGTAG GTATGCCTCT GCGGGTTGCT ATCACAGGCG GCGGGCAATC ACCTTCTTTA
GATGTCACCC TGCGCTTAAT TGGTAAAGAG CGTAGTATTA AACGTATCGA TCGCGCACTT
GAATTTATCG CTGCGCGCGT AGCTGCTTCA TAA
 
Protein sequence
MKVKTRFAPS PTGFLHVGGA RTALYSWLHA KSKGGEFVLR IEDTDIARST QEAVDAILEG 
MTWMGLTWDE GPYYQTKRFD RYKEIIAKML SDGTAYKCYC TKERVNELRE AQEKAGESPR
YDSKCRGLAP QNTDAPYVIR FKNPKEGSVK FDDHVRGPIE FSNTELDDLI IQRTDGTPTY
NFCVVVDDWD MGITYVVRGE DHINNTPRQI NILKALGAPL PEYAHVAMIL GDDGAKLSKR
HGAVSVMQFR DEGYLPEALK NYLVRLGWSH GDQEIFSEKE MIELFSLDAI NKAPSAFNTE
KLLWLNQHYI KSLDPAYIAQ HLAWHMTNQK IDMTNGPALP EIVSALSERA KTLVELATTS
RYFFEEYEDF DATAAKKHLR PVAEDALVLV KQKLQTSDDW TDPALHQIIN DTANELGVGM
GKVGMPLRVA ITGGGQSPSL DVTLRLIGKE RSIKRIDRAL EFIAARVAAS