Gene Ping_1610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1610 
Symbol 
ID4624639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1964220 
End bp1965065 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content38% 
IMG OID639796796 
Producthypothetical protein 
Protein accessionYP_943006 
Protein GI119945326 
COG category[S] Function unknown 
COG ID[COG2912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.119985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.579551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACAG TTTCCAAAAA TGAAAAAACA GAATTTATTA TAAATGAACA GTTTGATTTC 
GCAGAGCATT CACTTGTCGA TGCTGCTATT TCTGTCGAGT CTGAATTGAC TGGGCTGAAT
GTGGCAGAGT TTCATAAGAC GTTACGTTTA CAGCATCTTG TTTTGCAGTC TCAGTTATCC
GATTTTGATC TTGTTGATAA AGCGAAGTTG TTAAAATTAA TTGATTGTTT ATATCAACAA
CAAGCTTTCA AGGGTGATTG GAAGGCATTT TTTAAAGTAG AAAATGCCCT TGTTTCAAAT
GTATTATCAC GTCGTAAAGG TATTCCAATT AGTTTAGGCG TGTTATTACT GGATTTCTTG
AAGGAGAGTC AGTTTGATGC GCAGGGAATT TGTTTTCCGA GTGGTTTTAT TATTCGCGTC
AATATTGAAG ATGAAACGCT TTATATTGAT CCCTTTACCG GCGAATTAGC GTCAAGGAAT
CTACTCGAGC TTAAACTGCG CGGTCAATTA GGTAACCATG CCAGGTTAAG TCCTGAGATG
TTGGAGCCCG ATGATAATAA AACTATTATT ATGCGTTTAA TCAATGTTAT CAAGGCCGCT
TATGTTCAAG AGGAGTCATT AGAGCAGGCG TTACTTTGTT GCGATATGTT GCTGCGTATT
GATCCGAATG ATGCTTATGA GGTGAGAGAC CGCGGTTTTT TATTCCAGCA ACTAGACTGT
TTGAATTTAG CGCGCACAGA CTTTGAGTTT TTTATTGATC ACTATCCCCA AGACCCTATT
GTCGGTTTGT TAAAACGACA AATCAGACAA ATAGATATTG ATACTCCTAC GCAAGTTGTC
CATTAA
 
Protein sequence
MTTVSKNEKT EFIINEQFDF AEHSLVDAAI SVESELTGLN VAEFHKTLRL QHLVLQSQLS 
DFDLVDKAKL LKLIDCLYQQ QAFKGDWKAF FKVENALVSN VLSRRKGIPI SLGVLLLDFL
KESQFDAQGI CFPSGFIIRV NIEDETLYID PFTGELASRN LLELKLRGQL GNHARLSPEM
LEPDDNKTII MRLINVIKAA YVQEESLEQA LLCCDMLLRI DPNDAYEVRD RGFLFQQLDC
LNLARTDFEF FIDHYPQDPI VGLLKRQIRQ IDIDTPTQVV H