| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1606 |
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| Symbol | |
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| ID | 4624635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 1960563 |
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| End bp | 1961822 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639796792 |
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| Product | shikimate/quinate 5-dehydrogenase |
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| Protein accession | YP_943002 |
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| Protein GI | 119945322 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0373] Glutamyl-tRNA reductase |
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| TIGRFAM ID | [TIGR01035] glutamyl-tRNA reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.495518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.645678 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTCTAT TTGCTTTAGG AATTAACCAT CAAACGGCTT CAGTCGCATT GCGTGAAAAA
GTCGCGTTTT CAGCTGATCT GTTATTAGAT GCCTATCAAG CATTATTAGC GCAACCGACA
GTATTGGAAG CGGTCATTGT TTCAACTTGT AACCGTACTG AAATTTATTG TCATTTAAAA
CAGGACAACT GTGATGAGGT CATTAAGTGG CTTTGTTCTT TTCATCAGAT CGAAGATCAT
AAATTAAGAC CCAGTTTATA TTGTTATTCT GAGTATCAAG CTATCCAGCA TCTTTTTCGC
GTCTCATGCG GACTGGATTC GTTAGTGCTG GGTGAACCTC AAATTTTAGG GCAGATAAAA
CAAGCTTTTG CCACCGCTAA ACAAGCTAAA GGTGTGGATA AAATTGTTCA GAAATGGTTC
CAGCATACTT TTACGGTGGC AAAGCGAGTA CGTACTGAAA CGCAAATAGG CGCTAATGCT
ATTTCTGTTG CCTTTGCAGC TGTTTGTTTA GCAAAACAAA TATTCAGTGA TTTATCTCAA
AGCCGGGTCT TATTAATTGG TGCGGGTGAG ACAATCGAAT TAGTGGGTAA ATATTTAATT
GAGCACCAAG TCCCTAATAT TACTATTGCT AATCGTACTT TATCACGGGC GATGGCACTG
GTTGAGCAGT TTGATGCGCA GGCTATTACT CTGGGGGAAA TTCCCAATCA TCTTGCTCAA
GCTGATATCA TTATCTCATC GACAGCAAGT CCGCTTCCTA TTATTGGTAA AGGCATGGTT
GAAAGGGCGT TAAAAGCGCG TCGCAATCGA CCTATGTTAT TTATAGATAT CGCTGTACCG
CGTGATATTG AAGCGGAGGT TTCAGAGTTA CGTGATATTT ACCTTTACAG CGTTGATGAT
TTACAGGGCA TTATCGAAGA GAATAAACAA GCCCGTCAGG TCGCAGCGCT TGAAGCCGAA
AAAATTATCG ACGGCTGTAT TGTTGACTTT ATCTCATGGA TAGAATCACT AAAGGCGGTT
GAGTCTATTC GTACTTATCG TCAAAACAGT GAACAATTAC GAGATGATTT ATTAAATCGA
GCCTCTGCTG CGTTGCAAAA CGGAGAGGAA GCTGAGAATG TTTTAAAAGA GTTAGCCTTT
AAATTAACCA ATAAATTGAT TCATCATCCC AGTCTGGCTC TGAACGAGAC TGCTCGGTCG
GGTAATGATG ATGAACTGAT ATTGTTGCGT AATGCTTTGG GCCTGAGCAA AAAAGATTAA
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| Protein sequence | MPLFALGINH QTASVALREK VAFSADLLLD AYQALLAQPT VLEAVIVSTC NRTEIYCHLK
QDNCDEVIKW LCSFHQIEDH KLRPSLYCYS EYQAIQHLFR VSCGLDSLVL GEPQILGQIK
QAFATAKQAK GVDKIVQKWF QHTFTVAKRV RTETQIGANA ISVAFAAVCL AKQIFSDLSQ
SRVLLIGAGE TIELVGKYLI EHQVPNITIA NRTLSRAMAL VEQFDAQAIT LGEIPNHLAQ
ADIIISSTAS PLPIIGKGMV ERALKARRNR PMLFIDIAVP RDIEAEVSEL RDIYLYSVDD
LQGIIEENKQ ARQVAALEAE KIIDGCIVDF ISWIESLKAV ESIRTYRQNS EQLRDDLLNR
ASAALQNGEE AENVLKELAF KLTNKLIHHP SLALNETARS GNDDELILLR NALGLSKKD
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