Gene Ping_1552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1552 
Symbol 
ID4626417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1901181 
End bp1901939 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content38% 
IMG OID639796747 
Producttransposase, IS4 family protein 
Protein accessionYP_942957 
Protein GI119945277 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.185337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.508935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAGAT TAATGTTAAC TGATAAACGA TGGGAAATGC TACTTCATTT AATGAAAAGC 
ACAGGTCGTA TTTATAATAA GCCAGAGCAC AGGAATACTT TTGAGGGAAT TCTCTATCGA
CTTAGAACGG GTATTCCCTG GCGAGATTTA CCCAAAGAGT TTGGTGGCTG GAGTAGTATC
TTCAGGCGTT TTAACCTTTG GTCTAAGAAA GGTATTTTAT CCTACCTATT CAAAGAGTTA
GCAAAGGATT CCGATTTTGA TTGGGTGTTT ATAGATGGTT CAATCATTCG TGCTCATCAA
CATAGTACAG GTGCAGCTAC AACAGATAGC GAATGTATAG GTAAAAGTCG TGGCGGTAAC
GCTACAAAAA TTTATCTCGC GGTAGATAGC AATGGTTTCC CTATTTATTT TGAACTATCG
GAAGGTCAAA GAAACGATAT AACACATGCT CAAAGTTTAG TAGAGCATAC CTGTCAGGCT
AAAATAGTGA TTGCAGATAA AGGGTACGAT AGTGATATAT TTAGGGCGTT TATTGAATCG
GAAGGGATGG AATCAGTTAT CCCTAAACGG AAATATAACG GTGAAAAGCA AAAAGATGTT
GATTGGTGCC TATATAAATA TCGCCATTTA GTAGAGAATG CATTTGGCCG CATAAAGCAT
TTTCGTTCTA TATCAACCAG ATATGACAAG TTGGCTAGAA ATTATGCCAG CATGGTATCA
CTGGCATTTA TGATGATGTG GTTACCGATG TATTGTTGA
 
Protein sequence
MPRLMLTDKR WEMLLHLMKS TGRIYNKPEH RNTFEGILYR LRTGIPWRDL PKEFGGWSSI 
FRRFNLWSKK GILSYLFKEL AKDSDFDWVF IDGSIIRAHQ HSTGAATTDS ECIGKSRGGN
ATKIYLAVDS NGFPIYFELS EGQRNDITHA QSLVEHTCQA KIVIADKGYD SDIFRAFIES
EGMESVIPKR KYNGEKQKDV DWCLYKYRHL VENAFGRIKH FRSISTRYDK LARNYASMVS
LAFMMMWLPM YC