Gene Ping_1525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1525 
Symbol 
ID4626546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1872439 
End bp1872963 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content38% 
IMG OID639796725 
Producthypothetical protein 
Protein accessionYP_942935 
Protein GI119945255 
COG category[S] Function unknown 
COG ID[COG2862] Predicted membrane protein 
TIGRFAM ID[TIGR00645] conserved hypothetical transmembrane protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00081824 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.11672 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAAA AAATTGAAAT CGCATTAGAA ACAACCATTT TTAAAAGTCG TTGGTTGTTA 
GCCCCCTTTT ACGTGGGTTT AATGCTTAGC ATTATATTGT TGTTTGTGAA ATTTGTTCAG
GAATTTTGGC ATATCGCCAG TAATGTTATT TCAATGCCGG AAAGTGACGT CGTGATTGGT
ATCTTGGCGT TGGTTGATTT ATCACTTGTG GGCAGTTTAT TACTGATGAT TATTTTTAGT
GGCTATGAAA TTTTCATCTC AAAAATTGAT TTGGGTGATC ATGAAGACCG TCCTGAATGG
ATGGGAAAGG TTAACTTCTC AGGTCTCAAA CTGAAAGTCA TCGGTGCCAT TGTTGCGATC
TCAGCAATTG ACCTGTTAAA AGTTTTTATG AATCTTCCAG CCAGTCTTTC GAATGAGCAA
GCAAATTTGG TCATGTGGAA AGTTATTATT CACTTAACAT TTGTTGTTTC AGGGCTGATC
TTTGCTTACA TGGATAAAGT AGCCGGCGAT ACTAAGCGCC ATTAG
 
Protein sequence
MSKKIEIALE TTIFKSRWLL APFYVGLMLS IILLFVKFVQ EFWHIASNVI SMPESDVVIG 
ILALVDLSLV GSLLLMIIFS GYEIFISKID LGDHEDRPEW MGKVNFSGLK LKVIGAIVAI
SAIDLLKVFM NLPASLSNEQ ANLVMWKVII HLTFVVSGLI FAYMDKVAGD TKRH