Gene Ping_1475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1475 
Symbol 
ID4625815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1823709 
End bp1824923 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content42% 
IMG OID639796681 
Productaminotransferase AlaT 
Protein accessionYP_942891 
Protein GI119945211 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.714124 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATACCA TTCAAAAGTC CACTAAATTA GATAATGTCT GTTATGACAT TCGCGGACCC 
GTCCTTAAAC AAGCGCATAA ATTGGAGGAA GAAGGACAGC GTATTTTAAA ACTAAATATC
GGTAATCCTG CCCAATTTGG CTTTGATGCA CCTGAAGAAG TGATGATGGA TGTGATAAAA
AACCTGCCGC AAAGTCAGGG GTATTGTGAC AGCAAAGGCC TTTTTTCCGC CCGTAAATCG
GTTATGCAGC ATTATCAGGC GAAAGGTTTA CTGTCACTTG ATACCCATGA TATTTATATT
GGCAACGGAG TCAGTGAATT AATTGTAATG GCGATGCAGG GTTTATTAAA TAATGGTGAT
GAGCTATTGG TACCTGCACC GGATTACCCG CTATGGACAG CCGCAACAAA TTTATCCGGC
GGGAAAGCGG TCCATTATAT TTGTGATGAA CAGTCAGATT GGTTTCCCGA TATCGAGGAT
ATTAAATCTA AAATAACCGT CAAAACCAAA GGGATTGTTA TTATCAATCC CAATAATCCC
ACCGGCGCGG TTTACAGCAG GGAGTTATTA GAGCAGATTA TAGAGCTTGC CCGTATCCAC
AATTTAATTG TCTTTTCCGA CGAAATCTAT TCGAAAATAA TTTACGATGA TGCGGTGCAT
ATTCCACTCG CAACCCTCGC TGACGATATT TTAATTGTGA CCTTTGATGG ACTATCTAAA
GCCTATCGGG TTTGCGGTTT TCGCGTCGGT TGGATGATGA TAAGCGGCGC AAAAAAGCAA
GCGCGTGATT ATATTAATGG ATTAGAGATG CTCGCCAGTA TGCGTTTATG CGCCAATGTG
CCGATGCAGC ATGCTATCCA AACTTCCCTT GGCGGGTATC AAAGTATTAA TGAGTTAACC
GTCCCAGGCG GACGTTTATA TGAACAAACT CAAAGTGCAT GGAAGTTAAT TAATGATATT
CCCGGGTTAA GCTGTACTAA ACCTAAGGGC GCTTTATACC TTTTCCCTAA ACTGGATCAA
AAGAAATTTA ACATTAAAGA CGATCAGCGG TTTGCCATGG ATCTGTTGAT GGAAGAAAAA
ATATTAATTG TACAGGGGAC GGGCTTTAAC TGGCACTCAC CGGATCACTT CCGTATTGTT
TGTTTGCCGC GTGTTGATGA ACTCAGTACT GCTATCTCGA AAATAGGCCG TTTTCTGCAA
AGTTATCGCC AGTAG
 
Protein sequence
MYTIQKSTKL DNVCYDIRGP VLKQAHKLEE EGQRILKLNI GNPAQFGFDA PEEVMMDVIK 
NLPQSQGYCD SKGLFSARKS VMQHYQAKGL LSLDTHDIYI GNGVSELIVM AMQGLLNNGD
ELLVPAPDYP LWTAATNLSG GKAVHYICDE QSDWFPDIED IKSKITVKTK GIVIINPNNP
TGAVYSRELL EQIIELARIH NLIVFSDEIY SKIIYDDAVH IPLATLADDI LIVTFDGLSK
AYRVCGFRVG WMMISGAKKQ ARDYINGLEM LASMRLCANV PMQHAIQTSL GGYQSINELT
VPGGRLYEQT QSAWKLINDI PGLSCTKPKG ALYLFPKLDQ KKFNIKDDQR FAMDLLMEEK
ILIVQGTGFN WHSPDHFRIV CLPRVDELST AISKIGRFLQ SYRQ