Gene Ping_1474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1474 
Symbol 
ID4626033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1822557 
End bp1823492 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content42% 
IMG OID639796680 
Productporin 
Protein accessionYP_942890 
Protein GI119945210 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.989546 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG CAATTTTACC AGCAATGATC GCTGCCCTAT TAGCCACTTC TGCGCAAGCT 
GCGACTGTAT ATGATGCAGA CGGTACAACA GCAGATGTTT ATGGCCGTAT GCAGTTTGAT
ATTAAAGACG ACGGTACTGA CTCAGACGGC GTTGGCTCTG CGCGTATGGG CTTTAAAGCA
GTATCGTTTA TTAATTCTCA CGTTGATGCG ATGGCACGCG GTGAATGGCA GATTGCAGCT
GAAAATTCTA AGGGCAGCCA ATTTACAGCA CGTCATTTGT ATGCTGGTTT TCAAGGTGAA
GAAATGGGGT CATTAGTTTT TGGTCAAACG GATACTGCAT TCTACCAAGT GGTTGGCGTG
ACTGATATGT TTAACACTTA TGGTTACAAT GTAATTGATG GTATTTATCG TGGCCGTCAA
GAAGGGCAGA TTATCTATTC GGGTGAGTTT TCCGGTTTTT CAGTTGGCGC TTCTTACCAG
TTCCAAGATA AATCTAAAGC ACTTGACAAT AGCTTAGCTT TAGCTTTAGG TTATCAGATA
CAAGATGTTG CACTTAAGGC CGGTTACAGT GTAGAGCAGT ATGTTACAGC TGAAGACAAG
AAAAACTATG GTCTTTCAGC GACCTATACA ATGAATGATC TATATCTTGC TGCTGTTTAT
GCAGAATCTA AGCAAGATGG CGTTGCTGAC TTCCAAGGTT ATGACCTTTT TGCAAGTTAT
AACGTTGTTG CTGCGACGAC AGTGTATGGC GGTTATGGCT TCAAAGAAAA TACGGTCACA
AACACAGATA CTGTTGATGA AGTTACTCTA GGCGCACAAT ATGACTTTAA TGCGCAGCTA
AAAACGTGGA TTGAATACCA AGCAGATATG GTCAGTGCGA CAACTGCTGA CAAACACGAT
GACGCTGTAA CAGTTGCTTT ACAATACAAT TTCTAA
 
Protein sequence
MKKAILPAMI AALLATSAQA ATVYDADGTT ADVYGRMQFD IKDDGTDSDG VGSARMGFKA 
VSFINSHVDA MARGEWQIAA ENSKGSQFTA RHLYAGFQGE EMGSLVFGQT DTAFYQVVGV
TDMFNTYGYN VIDGIYRGRQ EGQIIYSGEF SGFSVGASYQ FQDKSKALDN SLALALGYQI
QDVALKAGYS VEQYVTAEDK KNYGLSATYT MNDLYLAAVY AESKQDGVAD FQGYDLFASY
NVVAATTVYG GYGFKENTVT NTDTVDEVTL GAQYDFNAQL KTWIEYQADM VSATTADKHD
DAVTVALQYN F