Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1474 |
Symbol | |
ID | 4626033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1822557 |
End bp | 1823492 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639796680 |
Product | porin |
Protein accession | YP_942890 |
Protein GI | 119945210 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.989546 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAG CAATTTTACC AGCAATGATC GCTGCCCTAT TAGCCACTTC TGCGCAAGCT GCGACTGTAT ATGATGCAGA CGGTACAACA GCAGATGTTT ATGGCCGTAT GCAGTTTGAT ATTAAAGACG ACGGTACTGA CTCAGACGGC GTTGGCTCTG CGCGTATGGG CTTTAAAGCA GTATCGTTTA TTAATTCTCA CGTTGATGCG ATGGCACGCG GTGAATGGCA GATTGCAGCT GAAAATTCTA AGGGCAGCCA ATTTACAGCA CGTCATTTGT ATGCTGGTTT TCAAGGTGAA GAAATGGGGT CATTAGTTTT TGGTCAAACG GATACTGCAT TCTACCAAGT GGTTGGCGTG ACTGATATGT TTAACACTTA TGGTTACAAT GTAATTGATG GTATTTATCG TGGCCGTCAA GAAGGGCAGA TTATCTATTC GGGTGAGTTT TCCGGTTTTT CAGTTGGCGC TTCTTACCAG TTCCAAGATA AATCTAAAGC ACTTGACAAT AGCTTAGCTT TAGCTTTAGG TTATCAGATA CAAGATGTTG CACTTAAGGC CGGTTACAGT GTAGAGCAGT ATGTTACAGC TGAAGACAAG AAAAACTATG GTCTTTCAGC GACCTATACA ATGAATGATC TATATCTTGC TGCTGTTTAT GCAGAATCTA AGCAAGATGG CGTTGCTGAC TTCCAAGGTT ATGACCTTTT TGCAAGTTAT AACGTTGTTG CTGCGACGAC AGTGTATGGC GGTTATGGCT TCAAAGAAAA TACGGTCACA AACACAGATA CTGTTGATGA AGTTACTCTA GGCGCACAAT ATGACTTTAA TGCGCAGCTA AAAACGTGGA TTGAATACCA AGCAGATATG GTCAGTGCGA CAACTGCTGA CAAACACGAT GACGCTGTAA CAGTTGCTTT ACAATACAAT TTCTAA
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Protein sequence | MKKAILPAMI AALLATSAQA ATVYDADGTT ADVYGRMQFD IKDDGTDSDG VGSARMGFKA VSFINSHVDA MARGEWQIAA ENSKGSQFTA RHLYAGFQGE EMGSLVFGQT DTAFYQVVGV TDMFNTYGYN VIDGIYRGRQ EGQIIYSGEF SGFSVGASYQ FQDKSKALDN SLALALGYQI QDVALKAGYS VEQYVTAEDK KNYGLSATYT MNDLYLAAVY AESKQDGVAD FQGYDLFASY NVVAATTVYG GYGFKENTVT NTDTVDEVTL GAQYDFNAQL KTWIEYQADM VSATTADKHD DAVTVALQYN F
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