Gene Ping_1467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1467 
Symbol 
ID4626026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1812487 
End bp1814844 
Gene Length2358 bp 
Protein Length785 aa 
Translation table11 
GC content41% 
IMG OID639796673 
ProductATP-dependent protease La 
Protein accessionYP_942883 
Protein GI119945203 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0466] ATP-dependent Lon protease, bacterial type 
TIGRFAM ID[TIGR00763] ATP-dependent protease La
[TIGR00764] lon-related putative ATP-dependent protease 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.635914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.937024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTG AATCAGAGCT GCAATTAACC CTGCCGGTAT TACCCCTACG TGATGTAGTG 
GTTTATCCGC ATATGGTTGT TCCACTTTTT GTTGGTAGAA AAAAATCTAT CAGCTGTTTA
GAAGCTGCCA TGGAGCAGGG TAAAAAAGTA TTATTAGTGG CGCAAACCGA AGCTTCATTA
GATGATCCAA AATTAGAAGA TCTGTACACC ATCGGGACAG TTGCAAATAT TCTGCAATTA
TTAAAATTAC CCGATGGTAC CGTTAAAGTG TTAGTTGAAG GCGTACAACG TGCGCAATTA
ATTAATAATA TTGAAAATAA AGATTATTTT TTTGCTGAGG TTGAGCTACT GGAAAGTGAA
GCCATTGATG AAAAAGAGGA AGAGGCTTTA TTACGCAGTG TAATGGGGCA ATTTGAATCT
TATATCAAGC TTAATAAAAA AATCCCACCC GAGGTGTTGG CCTCAGTGAA TGGTATTGAT
GATCCTGAAC GTTTAGCTGA TACCATCGCT GCACATATGC CCTTAAGTCT GGAAGATAAA
CAAACTGCCT TAGAGTTAAA CTCTATCACT GAGCGTTTGG AATATCTGAT GGCAATGATG
GAAAATGAAG AAGATATTCT GAAAGTTGAA AAACGTATCC GTTCGCGCGT TAAAAAGCAG
ATGGAGCGGA GTCAGCGCGA CTATTACCTT AATGAACAGA TGAAAGCGAT TCAAAAAGAG
TTGGGCGAGT CAGAAGAGGG TGGTAATGAT CATGACCAAC TTGCTGAAAA AATAGAACAA
GCGGGTATGT CTGAAGAAGC TTATGAAAAG GCAACGTCAG AGCTTAAAAA ATTAAAAATG
ATGTCACCAA TGTCATCTGA AGCCAGTGTT ATACGAACTT ATATTGAAAG CTTAGTGAAT
GTTCCCTGGA AAAAACGCAC GCCGATGAAA AAGAATCTGG CCAAAGCAGA GGAAATATTA
GAAGCGGATC ATTATGGTTT AGAAAAAGTA AAAGAACGTA TTTTAGAATA CCTTGCAGTG
CAGACGCGGA TTAATAAATT AAAGGGACCC ATTTTATGTT TAGTTGGTCC TCCCGGTGTT
GGTAAAACCT CATTAGGTCA GTCAATTGCG CGTTCCACCG GCCGTAAATA TATACGTATG
GCATTAGGCG GAGTTCGAGA TGAAGCGGAG ATTCGCGGAC ATCGTCGCAC CTATATCGGG
TCACTACCGG GTAAAATAAT TCAAAAAATG AGTAAAGTGG GGGTCAAGAA TCCACTGTTT
TTATTGGATG AAATAGATAA AATGGCGTCT GATCTGCGTG GTGATCCTGC TTCTGCTTTA
CTTGAAGTGT TAGATCCAGA GCAAAATAAT ACTTTTAACG ATCATTATTT AGAAGTTGAT
TATGATTTGT CCGATGTTAT GTTTGTTGCT ACGTCCAATT CAATGAATAT TCCCGGACCA
CTACTGGATC GAATGGAAGT CATTCGTTTG TCGGGTTATA CCGAAGACGA AAAATTGAAT
ATTGCTCAGC AGCATCTAAC TGGTAAACAA ATCAAACGTA ATGGTTTGAA AGAGAATGAA
ATTAATATCG ACGACAGTGC TATTATCGGG ATTGTTCGTT ATTACACGCG AGAAGCTGGG
GTACGTTCAT TAGAGCGCGA AATATCAAAA ATTTGTCGTA AAGTGGTTAA ACAGATACTG
CTTGATAAAA AGATCAAAAA AGTAGACGTC AATATTGATA ATTTAAAAGA TTATCTCGGG
GTGCGAGTAT TTGATTTTGG TAAAGCGGAT TCGGCCAATC AAGTAGGGCA AGTGACTGGA
CTTGCCTGGA CTGAAGTAGG CGGCGAGTTG TTAACCATTG AAGCGACCTC TGTTCCGGGT
AAAGGTAAAT TAACCTATAC CGGATCCTTG GGTGATGTCA TGAAAGAGTC TATTCAGGCT
GCGATGACAG TGGTGCGTGC AAAAGCTGAA GAGTGGCGAA TCAATGCTGA TTTTCATGAA
AAACGCGATA TTCATGTGCA TGTACCGGAA GGTGCAACGC CTAAAGACGG TCCAAGTGCG
GGTGCTGCCA TGTGTACTGT GCTGATTTCT AGCCTGACGG GTATTCCTGT TCGAGCTGAC
GTTGCGATGA CCGGGGAAAT TACGCTGCGT GGAGAAGTCT TACCAATTGG CGGCTTGAAA
GAAAAATTAT TAGCGGCAAG ACGAGGCGGC ATTAAAACTG TCTTAATTCC TTTTGAAAAC
ACCCGTGATT TGGAAGAGAT TCCTGATAAC ATTAAGGGCG AACTCGAAAT TAAACCTGTT
CGCTGGATTG ATGAAGTGCT GGAAATTGCG CTGCAAGAAA GTATAAAAGG TTTTTCTGTG
GAAAAGTCAC CAAAATAG
 
Protein sequence
MKTESELQLT LPVLPLRDVV VYPHMVVPLF VGRKKSISCL EAAMEQGKKV LLVAQTEASL 
DDPKLEDLYT IGTVANILQL LKLPDGTVKV LVEGVQRAQL INNIENKDYF FAEVELLESE
AIDEKEEEAL LRSVMGQFES YIKLNKKIPP EVLASVNGID DPERLADTIA AHMPLSLEDK
QTALELNSIT ERLEYLMAMM ENEEDILKVE KRIRSRVKKQ MERSQRDYYL NEQMKAIQKE
LGESEEGGND HDQLAEKIEQ AGMSEEAYEK ATSELKKLKM MSPMSSEASV IRTYIESLVN
VPWKKRTPMK KNLAKAEEIL EADHYGLEKV KERILEYLAV QTRINKLKGP ILCLVGPPGV
GKTSLGQSIA RSTGRKYIRM ALGGVRDEAE IRGHRRTYIG SLPGKIIQKM SKVGVKNPLF
LLDEIDKMAS DLRGDPASAL LEVLDPEQNN TFNDHYLEVD YDLSDVMFVA TSNSMNIPGP
LLDRMEVIRL SGYTEDEKLN IAQQHLTGKQ IKRNGLKENE INIDDSAIIG IVRYYTREAG
VRSLEREISK ICRKVVKQIL LDKKIKKVDV NIDNLKDYLG VRVFDFGKAD SANQVGQVTG
LAWTEVGGEL LTIEATSVPG KGKLTYTGSL GDVMKESIQA AMTVVRAKAE EWRINADFHE
KRDIHVHVPE GATPKDGPSA GAAMCTVLIS SLTGIPVRAD VAMTGEITLR GEVLPIGGLK
EKLLAARRGG IKTVLIPFEN TRDLEEIPDN IKGELEIKPV RWIDEVLEIA LQESIKGFSV
EKSPK