Gene Ping_1444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1444 
Symbol 
ID4624561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1777320 
End bp1777757 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content37% 
IMG OID639796650 
ProductNusB antitermination factor 
Protein accessionYP_942860 
Protein GI119945180 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATGA AACCAGCTGA ACGTCGACGC GCCCGCCAAT CTGCGGTACA GGCAATTTAC 
CAATGGCAAA TCACTAAACT GAGTGCCGGT CAAATTATTG AGCAATTTAG CACTGATCAG
GATCTGTCAA AAACAGATGT TCCGTATTTT AAAGAATTAT TAACCGGTGT TATTCATCGT
GTTGATTTTT TAGATGAAAA ACTATCTCCT TATCTTTCCC GTAAAATTGA AGATGTTGAT
ATGGTTGATA AAGCCGTATT ACGTTTAGCC ATGTTTGAGT TAACTCAGCG TACCGATATT
CCACATAAAG TGGTTTTGAA TGAAGCGATT GAATTAGCAA AAGATTTTGC TACGGATGAA
AGCTACAAGT TCGTTAATGG TGTTTTAGAT AAAGCATTAC GCAGTTTAAA ACTACGAGAA
GAAGAACAGG GCAAGTAA
 
Protein sequence
MKMKPAERRR ARQSAVQAIY QWQITKLSAG QIIEQFSTDQ DLSKTDVPYF KELLTGVIHR 
VDFLDEKLSP YLSRKIEDVD MVDKAVLRLA MFELTQRTDI PHKVVLNEAI ELAKDFATDE
SYKFVNGVLD KALRSLKLRE EEQGK